Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_008187.1
Length=191100
Score E
Sequences producing significant alignments: (Bits) Value
seq15 86.0 8e-12
seq146 82.4 9e-11
>seq15
Length=136221
Score = 86.0 bits (94), Expect = 8e-12
Identities = 117/161 (73%), Gaps = 2/161 (1%)
Strand=Plus/Minus
Query 15036 GCCAGATGCGCACGCCCGAGATTGGCGACAAGTTTTGCTCTGGT-ATGGCGCAAAAGGGC 15094
|||| | |||| ||||| | |||||||| || | ||| | | ||| ||||||
Sbjct 118498 GCCAAACGCGCCGCCCCGAACTCGGCGACAAATTCTCCTCGCGCCACGGCCAAAAAGGTG 118439
Query 15095 ACGTGCGGCATGATTTTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCC 15154
|||| | | | |||| || || || |||||||||||| ||| |||||| ||||||
Sbjct 118438 TCGTGGGTC-TCATTTCACCTCAAGAGGACATGCCCTTTTCCGACAAAGGCATTACGCCC 118380
Query 15155 GACATTATCATCAACCCCAACTGCATCCCGTCCCGCATGAC 15195
||||| ||||| ||||| | | ||||||||||||||||
Sbjct 118379 GACATCATCATGAACCCTCATGGTTTCCCGTCCCGCATGAC 118339
>seq146
Length=312205
Score = 82.4 bits (90), Expect = 9e-11
Identities = 105/145 (72%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 15054 AGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCC 15113
||||||||||||||||| ||| || | |||||||| ||| ||| || | | |
Sbjct 87763 AGATTGGCGACAAGTTTGCCTCACGTCACGGACAAAAGGGTACGATCGGTATCACCTACA 87822
Query 15114 CCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCA 15173
|||||||||||||| || || | ||| | || || ||||| |||||||| |||
Sbjct 87823 AGCAGGAAGACATGCCTTTCACTCGGGAAGGACTCACCCCTGACATCATCATCAATCCCC 87882
Query 15174 ACTGCATCCCGTCCCGCATGACCAT 15198
|| ||| ||||| || ||||||||
Sbjct 87883 ACGCCATTCCGTCTCGTATGACCAT 87907
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 611386184133600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |