Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq634 201 1e-46 >seq634 Length=211807 Score = 201 bits (222), Expect = 1e-46 Identities = 598/907 (66%), Gaps = 28/907 (3%) Strand=Plus/Plus Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052 ||||||||||| || | || | | ||| ||||| ||| | ||| || | | | | Sbjct 37365 TCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTC 37424 Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112 |||||||| | ||||| || || ||||| ||||| ||||||||||| ||||| || Sbjct 37425 CACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAAC 37484 Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172 | ||| | || | || || || || ||||| |||||| ||||| |||| | Sbjct 37485 AAATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAA-GCCAAA 37543 Query 63173 -ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCC 63231 | ||| | ||||| || || | ||| ||||| | | | || || || || || || || Sbjct 37544 GACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACC 37603 Query 63232 CTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGA 63291 ||| || | || | ||||||||| ||||| || | | ||| || || | || ||||| Sbjct 37604 CTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGA 37663 Query 63292 TGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTA--ATTGATAGA 63349 || || || || || ||| || || ||||||| || | | |||| ||| Sbjct 37664 CGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGAACATTG--AGA 37721 Query 63350 CCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCC 63408 || || || || || | || ||||| | ||||| ||| || | ||| || |||||||| Sbjct 37722 CCAATACCGCCAGCGGTCTTGGAGATCATAGCGCA-CGTCTTCAGCGTGTCGTAGATGCC 37780 Query 63409 CTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTG-GTGACGACTAG 63467 || || || |||||| | || | | || || ||| ||||| || | | | | | Sbjct 37781 TTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGT-G 37839 Query 63468 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGA-AAGTAGATTG 63526 |||| || || || | || ||||| ||||| || || |||| | || | |||| ||| Sbjct 37840 TTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACATGTAG-TTG 37898 Query 63527 TACGTCTCAATAGCTGAGTCTATATC----CCATTGATGAATTCCTACTGCGACACGCAT 63582 || ||||| || || || || || || | |||| || || || |||||||| Sbjct 37899 TATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATG----CCAACGGCTACACGCAT 37954 Query 63583 TAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTC 63642 | |||||| || || | ||| | |||||| |||||| | | || || ||| Sbjct 37955 GAGCATGTGTTGTGGACGCTCAGCAATCTTGCCGTTTATGCGGAGGAGATATGAGCGTTC 38014 Query 63643 CAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTT 63702 || || ||||| ||||| | | ||| ||||| || ||||| | ||| | ||||| Sbjct 38015 CAGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCGCGATCGTACACGATAGCAGAGTT 38074 Query 63703 GAGTTTATCCTTATATTTGTTAACTACATCCATGGTA---ATACT-TGAAATAATAGGAA 63758 | | |||| | | | || | || ||| | ||| ||||| || || Sbjct 38075 CAAATCATCCGCGTTCCTTATGACGATGTC----GTACACAGACTCGGAAATCATCGGCT 38130 Query 63759 AATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 63818 ||||||||| || || || |||| ||||| || |||| | |||| || ||| Sbjct 38131 GATGTTTCCCGTTCTTGGGGTTGATATAGTCATGTAGGTCCTTGACCACTGCAGAGAATT 38190 Query 63819 GtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAAT 63878 | || || || | ||||| |||||||| ||||| || | |||||| |||||||| |||| Sbjct 38191 GCTTCTTGGTCTGCTTGTGAAGATTTGAAACGGCGATGCGAGCGGCAAGAATGGCGTAAT 38250 Query 63879 CCGGATG 63885 | || || Sbjct 38251 CTGGGTG 38257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633625972575600