Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq412 114 1e-20 >seq412 Length=249799 Score = 114 bits (126), Expect = 1e-20 Identities = 157/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Minus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| ||||||| || | ||||| |||| ||||||||||| Sbjct 4527 AATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTC 4468 Query 25058 TGACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTG 25113 || || ||||| |||| || |||||| ||| || || || || ||||| || | Sbjct 4467 CGATACCATCGACAACGTCA---AATCAAAAATTCA-GGATAAGGAGGGCATTCCCCCGG 4412 Query 25114 ACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATT 25173 | || ||||| | || || |||||||| || | ||||||| ||||| || ||| | Sbjct 4411 ATCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACT 4352 Query 25174 ACAATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||| || || ||||| ||||| || || || || || Sbjct 4351 ACAACATCCAGAAAGAGTCCACCCTCCACTTGGTTCT 4315 Score = 86.0 bits (94), Expect = 5e-12 Identities = 134/190 (71%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 25023 ACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTG--AAGC 25080 ||||| || ||||||| | || |||||||| || ||||| || || || || ||| Sbjct 5013 ACCGGCAAGACCATCACCTTGGAGGTGGAGTCCTCGGACACGATTGA--CAATGTCAAGT 4956 Query 25081 AAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCA 25140 || ||| || || ||||| || || |||||||||||||| | ||||| || |||| Sbjct 4955 CGAAGATCCAGGATAAGGAAGGCATCCCGCCTGACCAACAGCGCTTGATTTTCGCAGGCA 4896 Query 25141 AACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTAC 25200 | || | || |||| || ||| || ||| ||||| || || || || || || || | Sbjct 4895 AGCAGCTCGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCAACTCTGC 4836 Query 25201 ATTTAGTGCT 25210 || | || || Sbjct 4835 ATCTCGTCCT 4826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433323981018215