Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq738 102 2e-16
seq46 98.7 2e-15
seq153 84.2 4e-11
>seq738
Length=174967
Score = 102 bits (112), Expect = 2e-16
Identities = 125/168 (74%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | ||||| ||| ||||||| ||||||| || || || |||||||| || |
Sbjct 80845 CCAACTTCGGTCTTGACGCCGAGTTGGTTTCTCACTCCCGTATGCGTGGTCTTTCCGGTG 80786
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
| ||| ||||| | ||| ||| || |||| |||||| | ||| || |||||||
Sbjct 80785 GTCAGCGTGTCAAGGTCGTCCTCGCTGCTTGCTC-GTGGCAGCGCCCCCATTTGATCGTC 80727
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
||||||||||| ||||||||||| || ||||| ||||| ||||||
Sbjct 80726 CTCGACGAGCCGACCAACTATCTCGATCGCGACTCTCTGGGTGCTCTG 80679
>seq46
Length=404262
Score = 98.7 bits (108), Expect = 2e-15
Identities = 111/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|||||||| || | ||| || |||| ||||| ||||||||||||||||||||| |||
Sbjct 338060 TCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 338001
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|| ||||| ||| | | ||| || || | || | |||||| || || ||||| |
Sbjct 338000 GCGTTGTAGAACTTTTGGTTGCCGAGAGCCAAGAGCAGGCGGTCGGCGACGAACTCGATG 337941
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCC 251711
||||| | ||| || | |||||||||||
Sbjct 337940 TACTGGCACATGAGCTTGGAGTTCATGCC 337912
>seq153
Length=62389
Score = 84.2 bits (92), Expect = 4e-11
Identities = 88/116 (76%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || |||||||| || || ||||||||||| |||| | |||| ||||| || ||
Sbjct 39527 GTCGGCTCTCTGTCTGGAGGATGGAAGATGAAATTGGCTTTGGCTCGAGCCATGCTTATG 39586
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811
|| ||||||||||| |||| || || || ||||| ||| ||||| |||||||
Sbjct 39587 CGAGCCGATGTCCTGTTGCTCGACGAACCTACCAATCACTTGGACGTTGCCAACGT 39642
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027826778270001
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |