Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq634 271 1e-67
seq46 253 4e-62
>seq634
Length=211807
Score = 271 bits (300), Expect = 1e-67
Identities = 1026/1585 (65%), Gaps = 65/1585 (4%)
Strand=Plus/Plus
Query 243877 GTTGAGGGACTGGCTCTGGTCGACGAAGGGCGCC-CGCTCTGCGGCCATGGTGATGA-GG 243934
|||||| |||||| ||| |||| ||||| |||| || || |||||||| |||| ||
Sbjct 36338 GTTGAGCGACTGGGACTGATCGATGAAGG-CGCCACGGTCAGCGGCCATCTGAATGATGG 36396
Query 243935 TCCTTCTGAGATATCTCATACGCCGTCTTGTAGATGGGCTTGAGGTGCTCGGGGAACCCT 243994
| | ||| || || || || | |||||||| | | ||||| | ||||| || |
Sbjct 36397 TACG-CTGGGAGATTTCCCACACGGTCTTGTATAGCGCCTTGATTTCATCGGG-AATGTT 36454
Query 243995 TCGA-TGTTCTGCACCGAGCCCTTGTGGACGATGAGCTGGGTGCGCATGTTATCGTTCCA 244053
|| | |||| | || || | | |||||| || | |||||| || |||
Sbjct 36455 AGGAATCCTCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCA 36514
Query 244054 CAGGCCCAAGCGCTCCAGCGCCTCGACCAGGTGCCTG---TTCACCACCTGAAACTCTCC 244110
|||||||| | ||| ||| |||| ||| | || || ||||| ||||| ||
Sbjct 36515 CAGGCCCATGTCAACCAAATCCTT---CAGGAGCCAGGGGTTGACGACCTGGAACTCGCC 36571
Query 244111 CGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGGCTCGATGCTCTCCGTGTTGCC 244170
| || || ||||| ||||| |||| | | || |||| || || ||| |||
Sbjct 36572 GGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGTAGCC 36631
Query 244171 CAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACACCAGCAGACTGTTCCTCACGCC 244230
|| || || | ||| ||||| |||||||| | || ||||| ||| | || ||
Sbjct 36632 AAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACC 36691
Query 244231 GTGCCTCTG-GATGCGGAGTCT-GAGCTCGTTCCAGTCCCACATGCCCGAGAGGTCCTCG 244288
||| | || ||| | | || ||| | | ||||||||| |||||| |
Sbjct 36692 ATGC-TGTGCGAT-CTTTGCCTTGAGAGCATCCCAGTCCCA---------GAGGTCGGTG 36740
Query 244289 CGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGCTGACGGGGCTGCCCTCGTAG 244348
| ||| |||||| ||| | || || | |||| ||| || |||||||||
Sbjct 36741 GGCGTGATATTCCACATATCATATTGAAGTATGCCCTGCGAGACAGGAGAGCCCTCGTAA 36800
Query 244349 GTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCGAGGGCGGCGTAGTAG 244408
|| || ||||| || |||||| | || | ||| || |||| ||||
Sbjct 36801 GTTTCATATGGACCAAGTTCCTTGGCCAGATCGCAAGACGATGTGAGAGCAGCGTGGTAG 36860
Query 244409 ATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAGGTGAAGGGGATGCCC 244468
|||||||| |||||| |||| | | | || | | || |||||| | || |
Sbjct 36861 ATGGTCTCAAAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCGAAGGGCAGGCGC 36920
Query 244469 ATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATGGGTCTGTGTCGC--- 244525
| | |||| | || || || ||||| || || | |||| || |||||||
Sbjct 36921 AGGGCGAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCTGTGTCTGAAG 36980
Query 244526 TTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCCGTCGATCACCTTGTTGAGG 244585
||| || ||| ||||| || || ||||| ||| | ||||| | |||||| ||
Sbjct 36981 TTGCTGTTGCGA---GCTTCAGGAACCGGGTAGTGATTGACCTCGATAATCTTGTTCAGA 37037
Query 244586 TTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTACTCGTAGGGATCC 244645
|| || |||| | ||||||| ||| ||| ||| || || |||||| ||
Sbjct 37038 TTACGAGTGACGACCTGGACGACTTCGTGGAGCTTCTGGAAATCATACTCG-------CC 37090
Query 244646 TCGGCG-ATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAGGTTGCAGACGGC 244704
|| | ||| ||| ||| || | ||| || | ||||| ||||||||||||
Sbjct 37091 ACGTTGCATG----TCC--ACATACGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGC 37144
Query 244705 CACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACTGCACTTGATGGT 244764
||||| || | |||||||| | |||||||||||||||||| || || ||
Sbjct 37145 AACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTTAGAGCTGCGAATAGT 37204
Query 244765 GCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTTGTAGAGCATGAAGGGCCC 244824
|| |||| || || ||| ||| |||||| || |||||||||||||| | ||
Sbjct 37205 TCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCATCCTTGTAGAGCATATACGGGTT 37264
Query 244825 CCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTCCCTAGCCTTGACCGTCCT 244884
|| |||||| |||||| |||||| | || |||||| | | || || |||
Sbjct 37265 TCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTCTGGGCGCGCACAGTCTC 37324
Query 244885 GCGAGCCTTGCCCTCTGCCTCGTAGCGGGTG-TACAGGGCCTCGAACTCGGGGCCCCAGA 244943
|| | ||||| ||||| || | ||| ||||| ||||||||||| ||| |||
Sbjct 37325 TCGTCCGCGTCCCTCGGCCTCATA-CTTGTGATACAGCTCCTCGAACTCGTCGCCATAGA 37383
Query 244944 CCTCGTCTAGGCCGGGGCACGACGC-CGGGCACATGAGACTCCACTCGCCGCCGTCCTTG 245002
| ||| | | || ||| | || |||||| | ||| ||||||| || |||| |
Sbjct 37384 CGTCGGCCAACCCAGGGG-CTTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGG 37442
Query 245003 ACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAGAGGTCCCTGGTCCTCTGC 245062
|||| || |||||||||||| || ||||| || || | ||| | || | || | |
Sbjct 37443 ACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGATC 37502
Query 245063 TCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGC 245122
|| ||| |||| |||||| | || || | ||| ||||||| ||| ||||||| |||
Sbjct 37503 TCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGTGCCATGGC 37562
Query 245123 TCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCG 245182
|| | ||||| |||| || || || ||||| ||||| |||||||| | | | ||
Sbjct 37563 TCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTGGTCGA----CATAACG 37618
Query 245183 AGCG----CGTTGAAGATGCGCAGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238
|||| ||| ||| || || |||| | | |||||| || ||||| || ||
Sbjct 37619 AGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCGTTCC 37678
Query 245239 CTTGATGTAGGCGCCCTTGCCCCTGAGGTTGCTGATGGACAT----GCCTAGTCCGCCGG 245294
|||||| | ||| || | | || ||| |||| |||| || | ||||| |
Sbjct 37679 ACCGATGTATGAGCCGGTGGCAC---GGATGC-GATGAACATTGAGACCAATACCGCCAG 37734
Query 245295 CGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCTATGCCCTCCATGCTGTCCG 245354
|| ||||||||| | ||||| |||| | ||||| ||||| || ||||||||
Sbjct 37735 CGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCAT 37794
Query 245355 ACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTGGGGCTGCACGAGTTGAACA 245414
||| || | || || ||||||||||||| ||| || ||||| | | | |||||| |
Sbjct 37795 CCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAAAA 37854
Query 245415 GAGTGGGGCTGGCGTGGGTAAAGTA 245439
| || || ||||| || |||||
Sbjct 37855 GCGTTGGAGACGCGTGTGTGAAGTA 37879
>seq46
Length=404262
Score = 253 bits (280), Expect = 4e-62
Identities = 331/450 (74%), Gaps = 21/450 (5%)
Strand=Plus/Plus
Query 42705 CTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTC 42764
|| || ||||| ||||||| || |||||||||||||| || ||||||| |||||||||
Sbjct 337645 CTCGTTGCCTTCGCCGCCGTAGAAGGCATCTTCTTCTCCGGTTCCTTCGCGTCCATCTTC 337704
Query 42765 TGGCTCAAGCAG-AAGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAG 42823
||| | ||| || || || |||||||| ||||||||||| ||||||||||| |
Sbjct 337705 TGGTTGAAGAAGCGCGGCCTC-ATGCCCGGCCTCACCTTCTCCAACGAACTCATATCTCG 337763
Query 42824 GGACGAGGGGCTGCATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAA 42883
|||||||| |||| | ||||| || ||||| || ||||| | ||||| ||||
Sbjct 337764 TGACGAGGGCATGCACACCGACTTCGCGTGCCTACTCTTCTC---TCTCCTCA-ACACAC 337819
Query 42884 G-CCCTCGAAGGAGCGGGTCCGGGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGT 42942
| || ||| | || ||| |||||||||||| || || || |||||| | ||||
Sbjct 337820 GTCCGTCGCAAAAGGAAGTCGAGGCCATCATCACCGAAGCTGTCACCATCGAGCAAGAGT 337879
Query 42943 TCCTCACGCAGTCGCTGCCCGTGT-CCCTGGTCGGCATGAACCACGACCTCATGTGCAAG 43001
||||||| | | || |||||| | || ||||||||||| | | ||||||||| ||
Sbjct 337880 TCCTCACAGAAGCTCT-ACCGTGTGCTCTTCTCGGCATGAACTCCAAGCTCATGTGCCAG 337938
Query 43002 TACATCCAGTACGTCGCCGACCATCTCCTGTGCCAGATGGGTCTCAGCCGCC------TC 43055
|||||| ||| ||||||||||| || || | ||| |||| || || ||
Sbjct 337939 TACATCGAGTTCGTCGCCGACCGCCTGCTCT------TGGCTCTCGGCAACCAAAAGTTC 337992
Query 43056 TACAACACGCCGTGCCCCTTCGACTTTATGGAGAACATCTCGTTGGAGGGCAAGACCAAC 43115
|||||| | | |||||||||||| ||||||||||||||| ||| || ||||| |||
Sbjct 337993 TACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGTAAGACAAAC 338052
Query 43116 TTTTTCGAGAAGCGCGTCGCCGACTACCAG 43145
|| ||||||||| | |||| || ||||||
Sbjct 338053 TTCTTCGAGAAGAGGGTCGGTGATTACCAG 338082
Score = 109 bits (120), Expect = 1e-18
Identities = 181/258 (70%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 42300 ATCTGGTCCATGTACAAGAAGGCGCAGTTCTCCAACTGGACCGCCGAGGAGATTGACCTG 42359
|||||| |||||||||||||| | ||| ||||||||||| ||||| || ||
Sbjct 337182 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTTTGGACCGCCGAAGAGATCGATCTC 337241
Query 42360 GCCAAGGACACGGCCGGCTGGGA---GTCACTGTCTGAGAACGAAAAGTTTTTCCTCAAA 42416
|||| ||| || |||| | | | || || |||| || ||| ||
Sbjct 337242 TCCAAAGACCTCCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTCTTCATCTCC 337301
Query 42417 AACATACTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGG 42476
|| | || ||||||||||||||||| |||||||| ||||| |||||||||| | |
Sbjct 337302 CACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCAACGAGAACCTGGTCGAGCGC 337361
Query 42477 TTCATGAAAGAGGTGC-AGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCAT 42535
|| | |||||||| ||| | |||||||| |||||||||||||||||||| ||
Sbjct 337362 TTTAGCGGAGAGGTGCAAGTGC-CCGAGGCGCGATGCTTCTACGGCTTCCAGATCATGAT 337420
Query 42536 AGAGAACGTGCACTCTGA 42553
|||||| | ||||| ||
Sbjct 337421 GGAGAACATCCACTCGGA 337438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944330216973360
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