Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq634 242 4e-59 seq46 138 1e-27 >seq634 Length=211807 Score = 242 bits (268), Expect = 4e-59 Identities = 1117/1746 (64%), Gaps = 27/1746 (2%) Strand=Plus/Plus Query 113587 GGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATG 113646 |||| ||| |||||||||||| | || |||||||| || ||||||| | | || Sbjct 36236 GGCCATTGTTCGGAGGTAGTAGAGGCCGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTG 36295 Query 113647 CATCGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 113706 |||||| | | |||| | || || | |||| | ||| | ||||| || Sbjct 36296 CATCGATGTAATCTTGCCCATGGTAGGCTCCTTCATGTGAATGTTGAGCGACTGGGACTG 36355 Query 113707 ATCGATGAAGCGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTC 113763 |||||||||| ||||| || || ||||| | ||| | | | | || | ||||| Sbjct 36356 ATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATGA--TGGTACG-CTGGGAGATTTC 36412 Query 113764 CCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 113823 |||||| || |||| || ||| || ||||| || || | || | |||||||| Sbjct 36413 CCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATGTTAGGAATCCTCTGGATGGA 36472 Query 113824 GCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAG 113883 ||||| | || ||| | | |||||| | | ||||| || || || | | Sbjct 36473 ACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGGCCCATGTCAACCAA 36532 Query 113884 ATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATA 113943 ||||| || ||| ||||| || ||||| || || | || | || Sbjct 36533 ATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCCGGCCAAAACACGGCGGGAGTA 36592 Query 113944 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCGGTGGAGG 114002 ||| |||| || ||||| || ||||| ||||||| | |||||| |||||| ||||||| Sbjct 36593 GATGTTGGAGGTATATGGTTCGAAGCATTCATTGT-AGCCAAGAATTTGGGATGTGGAGG 36651 Query 114003 CTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCT 114062 | || |||||||| || | || || ||| || | ||| | | || | ||| Sbjct 36652 CAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACCATGCTGTGCGATCTTTGCCT 36711 Query 114063 TGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGA 114122 |||| || |||||||| || | | | | | |||||||||| | || || | Sbjct 36712 TGAGAGCATCCCAGTCCCAGAGGTCGGTGGGCGTGATATTCCACATATCATATTGAAGTA 36771 Query 114123 TACCTTGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATT 114182 | || || ||| | || || ||||| | || || ||||| || ||| |||| | Sbjct 36772 TGCCCTGCGAGACAGGAGAGCCCTCGTAAGTTTCATATGGACCAAGTTCCTTGGCCAGAT 36831 Query 114183 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCC 114241 || | || ||| || ||||| || || |||||||| || | | || | | || Sbjct 36832 CGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCTTCC 36891 Query 114242 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGG 114301 ||| | ||| || || || | || || | || ||||||| ||||| ||| Sbjct 36892 TTG-CTTCGGGAGAGTCGAAGGGCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCCTGG 36950 Query 114302 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAA 114361 || || || || | || | ||||| | || || ||||| || || || Sbjct 36951 ACTCCAAGACCGACAGGCCTGTGTCTGAAGTTGCTGTTGCGAGCTTCAGGAACCGGGTAG 37010 Query 114362 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 114421 ||| ||||||| | | || ||||| ||||| |||| || ||| || ||| Sbjct 37011 TGATTGACCTCGATAATCTTGTTCAGATTACGAGTGACGACCTGGACGACTTCGTGGAGC 37070 Query 114422 TTTTCGTAATCAAAACTGCGA-GTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGC 114480 || | | ||||| | || | || | | | |||||| ||| || || | || || Sbjct 37071 TTCTGGAAATCATACTCGCCACGTTGCATG-TCCACATACGCAGGGAGTGCAAGCGAGGC 37129 Query 114481 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT 114540 || || || || | |||||| | |||||||| || || || || || | || Sbjct 37130 CAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTT 37189 Query 114541 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGT 114599 || || ||| || || | |||||| || || | |||| | || || |||||||||| Sbjct 37190 AGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTT-GCTTTTGCGGTTGCATGCATCCTTGT 37248 Query 114600 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCG 114658 | ||||| || || | || ||||| || |||| || ||| || || | ||||| | || Sbjct 37249 AGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTCT 37308 Query 114659 GCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG-TAGAGGGCTTC 114717 | ||| ||||||| | | || ||||| |||| ||| ||||| || || | || Sbjct 37309 G-GGCGCGCACAGTCTCTCGTCCGCGTCCCTCGGCCTCATAC-TTGTGATACAGCTCCTC 37366 Query 114718 AAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA 114777 ||||| || || | | || | | ||| || || | | |||||||| |||| ||| Sbjct 37367 GAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTCCA 37426 Query 114778 TTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAG 114837 | ||| |||| || ||||||||||||||||| || ||||| ||||| |||| | Sbjct 37427 CTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAA 37486 Query 114838 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 114897 ||| || ||| ||||| | || || || || | || | ||| | | || Sbjct 37487 ATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGAC 37546 Query 114898 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTG 114954 ||| |||||||| || || ||||| | |||| | || || | ||| |||| Sbjct 37547 ATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTG 37606 Query 114955 GTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTG 115014 || ||||| | || ||| ||| | || |||||||| || |||| || | || Sbjct 37607 GTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGACGT 37666 Query 115015 GCCATTTG-TCCCCCGA-ATACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCA 115072 || || | ||| |||| || ||| | |||| | || ||| | | | |||| Sbjct 37667 TCCGTTCGTTCCACCGATGTATGAGCC--GGTGGCACGGATGCGATGAACATTGAGACCA 37724 Query 115073 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCG 115132 ||||| || || ||| ||||| |||||| | | || || ||||||| || ||| Sbjct 37725 ATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTCG 37784 Query 115133 ATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCA 115192 || |||| |||| | |||| ||||||||| ||||| ||||| | ||||| || Sbjct 37785 ATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCG 37844 Query 115193 GCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGT 115251 |||||||| || ||||| | |||||| |||| || | | |||||| | | ||| || Sbjct 37845 GCGTTGAAAAGCGTTGGAGACGCGTGTGTGAA-GTATTTGTTGGACATGTAGTTGTATGT 37903 Query 115252 CTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTA 115311 ||| | | | |||||||| ||||| || || | | || ||||| | ||||| Sbjct 37904 CTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCATGAGCATGTG 37963 Query 115312 TTGGGG 115317 ||| || Sbjct 37964 TTGTGG 37969 >seq46 Length=404262 Score = 138 bits (152), Expect = 1e-27 Identities = 309/455 (68%), Gaps = 12/455 (3%) Strand=Plus/Minus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || || |||| ||||||||||||||||||||| ||| ||| ||| |||||||| Sbjct 338079 GTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTCCAT 338020 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCA-AATTGTTGGCACCCCA-ATCTGTTTGAGGAGA 125875 || || || ||||| | | ||| | || | |||| || | | | ||| || Sbjct 338019 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGAGAGCCAA--GAGCAGG 337962 Query 125876 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 125935 || || | |||| |||| ||||||| |||| || |||||||| |||| || | Sbjct 337961 CGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAGAGCA 337902 Query 125936 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCG 125995 || || || || || || |||| | | ||| || || ||||| | |||||| Sbjct 337901 CACGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGATGGCC 337842 Query 125996 T-GAATGG--TGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAA 126051 | || | | | | | | || | ||| | | || ||||||| |||| | || Sbjct 337841 TCGACTTCCTTTTGCGACGGACGTGTGTTGAGGAGAGA---GAAGAGTAGGCACG-CGAA 337786 Query 126052 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || ||| | ||||||||||| || |||||||| || |||||| || || ||||| Sbjct 337785 GTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCAT 337726 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 ||| || ||||||||||||||||| || | || ||||| ||||||||||| || || Sbjct 337725 GAGGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGATGCCTTC 337666 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGCAAAGG 126206 || ||||| |||| ||| || | ||||||| Sbjct 337665 TACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGG 337631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597347917673880