Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq412 96.9 4e-15
>seq412
Length=249799
Score = 96.9 bits (106), Expect = 4e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 41980 GACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAG 42039
|||| || | | ||| | |||||| |||| || |||||| || || ||||| || |
Sbjct 4070 GACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCG 4129
Query 42040 CCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTG 42099
|| || || |||| || | |||||||||||| || ||||| || |||||||| | |
Sbjct 4130 AGAGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGG 4189
Query 42100 GCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCC 42158
| | | ||| || ||| ||| || || | ||| | | | |||||| ||| ||
Sbjct 4190 GAATACCCTCTTTATCCTGGATCTTGGACTTCA-CGTTGTCGATTGTGTCGGACGACTCA 4248
Query 42159 ACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208
|| || | |||||| || ||||| || || ||||| || ||||| |||||
Sbjct 4249 ACCTCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
Score = 86.0 bits (94), Expect = 7e-12
Identities = 122/169 (72%), Gaps = 2/169 (1%)
Strand=Plus/Plus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| || | ||| || || | || || |||||||| || |||||
Sbjct 4563 CTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 4622
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| | |||||| ||||| | || | || |||||| ||| ||| || ||||| |||
Sbjct 4623 GATCAATCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTTCGATTTGA-CGT 4681
Query 42137 CGCC-ACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
| | | || ||||||||||| || || | || ||||| || || ||
Sbjct 4682 TGTCGATGGTATCGCTCGATTCGACCTCAAGGGTAATGGTCTTACCGGT 4730
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543207632688240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |