Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq412 109 5e-19 >seq412 Length=249799 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || ||||| || |||||||| || | | |||||| | |||||||||||||||||| Sbjct 4330 GTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCG 4389 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | ||||| |||||||| || || ||||| || || || || || |||||| || Sbjct 4390 GCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGAATTTTTGATTTG 4449 Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426 || || | ||||| | ||||| || | || | ||||||||||||| || Sbjct 4450 ACGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTC 4509 Query 64427 TTTACGAAAATTTGCATT 64444 || ||||| || |||||| Sbjct 4510 TTGACGAAGATCTGCATT 4527 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||| || | | ||||| | || | ||||| || || || |||||||| || | Sbjct 4071 ACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 4130 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 || || || |||| || | |||||| || ||| | ||||| || |||||||| || || Sbjct 4131 GAGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGG 4190 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395 ||| || ||||| || || || || ||| || || | ||| || | || || Sbjct 4191 AATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAAC 4250 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||| || | ||||||||||| | || || ||||| || ||||| Sbjct 4251 CTCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499640047128840