Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq634 203 3e-47
>seq634
Length=211807
Score = 203 bits (224), Expect = 3e-47
Identities = 604/925 (65%), Gaps = 10/925 (1%)
Strand=Plus/Minus
Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774
|| ||| | | ||||| ||| || || ||||| || || |||||| || | |||
Sbjct 38044 AACTACCAGTTCTTTGGCTTTAAGACCCTGGAACGCTCATATCTCCTCCGCATAAACGGC 37985
Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834
| | || | ||||| || || || |||| ||||| || ||| | || || |||||| |
Sbjct 37984 AAGATTGCTGAGCGTCCACAACACATGCTCATGCGTGTAGCCGTTGGCATCCACGGCGAA 37925
Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894
||||| ||| | | | | | || ||||| |||| | || ||
Sbjct 37924 GACATCGAGAAGGCCATCGAGACATACAACTACATGTCCAACAAATACTTCACACACGCG 37865
Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954
| || || || |||||||| || || || ||||||||||| || || ||||| ||
Sbjct 37864 TCTCCAACGCTTTTCAACGCCGGAACACCCAACCCACAGATGTCCTCCTGCTTCCTCATC 37805
Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014
| ||||| ||| |||| || || | ||||| || ||| || || | |||
Sbjct 37804 GATATCAAGGATGACAGCATCGAAGGCATCTACGACACGCTGAAGACGTGCGCTATGATC 37745
Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074
|| || ||| || || || || ||| ||| || | | ||||||| || || |||
Sbjct 37744 TCCAAGACCGCTGGCGGTATTGGTCTCAATGTTCATCGCATCCGTGCCACCGGCTCATAC 37685
Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134
||| | || || || || || |||||||||||| |||||||||| || |||| ||||||
Sbjct 37684 ATCGGTGGAACGAACGGAACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACAAC 37625
Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194
| || || || || ||||||||||| | | | ||| ||||||| |||| |||
Sbjct 37624 ACCGCTCGTTATGTCGACCAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTC 37565
Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254
||||| |||||||| || || | ||| | || || || |||||||| ||||| ||
Sbjct 37564 GAGCCATGGCACGCCGATGTCTTTGGCTTCCTTGATCTTCGCAAGAACCATGGCAAGGA- 37506
Query 94255 CTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311
|||| | ||| | || | ||||||||||| ||| | || ||||| || |||||
Sbjct 37505 --AGAGATCCGCGCCCGTGATTTGTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAG 37448
Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371
|| ||| || | || | |||| |||||| || || || ||| || || || ||
Sbjct 37447 CGGGTCCAGGATAATGGAGAGTGGACTCTTTTCTGCCCGAACGAAGCCCCTGGGTTGGCC 37388
Query 94372 GACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGG 94429
||||| | ||| || | || || || ||||| || || | |||| | ||
Sbjct 37387 GACGTCTATGGCGACGAG-TTCGAGGAGCTGTATCACAAGTATGAGGCCGAGGGACGCGG 37329
Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
| | || | || || |||||| ||| | ||| | || | ||| ||||
Sbjct 37328 AC-GAGAGACTGTGCGCGCCCAGAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGA 37270
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549
| || | || || || | | |||||| | |||| ||| ||||||| || |||
Sbjct 37269 CTGGAAACCCGTATATGCTCTACAAGGATGCATGCAACCGCAAAAGCAACCAGAAGAACC 37210
Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609
|||| || ||||| || || ||||||||||| | ||||| || | || || |
Sbjct 37209 TCGGAACTATTCGCAGCTCTAACCTCTGCACCGAGATCATTGAGTACACCGCACCCGATG 37150
Query 94610 AGATTGCTGTGTGTAACCTGGGCTC 94634
|| |||| || || ||| ||| |||
Sbjct 37149 AGGTTGCCGTCTGCAACTTGGCCTC 37125
Score = 127 bits (140), Expect = 2e-24
Identities = 201/287 (70%), Gaps = 6/287 (2%)
Strand=Plus/Minus
Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148
||| |||||||||| ||||||||||| || |||||||| | || || |||||| ||||
Sbjct 36682 AACTCGCTGCTTGTTGCCCCCATGCCTACTGCCTCCACATCCCAAATTCTTGGCTACAAT 36623
Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208
|| | |||||||| | ||||||||| | ||| | | || || | ||||| || |||
Sbjct 36622 GAATGCTTCGAACCATATACCTCCAACATCTACTCCCGCCGTGTTTTGGCCGGCGAGTTC 36563
Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAG 95268
| ||| ||||| ||||| ||| || |||| ||||| ||||||
Sbjct 36562 CAGGTCGTCAACCCCTGGCTCCTGAAGGATTTGGTTGACATGGGCCTGTGGTCTGACAAC 36503
Query 95269 GTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACATCCCGCAAATACCG 95325
| ||||||| | | |||| | || ||| |||||| || || | || ||
Sbjct 36502 ATGAAGAACCGCATCAT---CGCCGATGGTGGTTCCATCCAGAGGATTCCTAACATTCCC 36446
Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372
|| || ||||||||||| ||||||||||||||||| ||| | |||||
Sbjct 36445 GATGAAATCAAGGCGCTATACAAGACCGTGTGGGAAATCTCCCAGCG 36399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494718493945560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |