Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq634 203 3e-47 >seq634 Length=211807 Score = 203 bits (224), Expect = 3e-47 Identities = 604/925 (65%), Gaps = 10/925 (1%) Strand=Plus/Minus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | | ||||| ||| || || ||||| || || |||||| || | ||| Sbjct 38044 AACTACCAGTTCTTTGGCTTTAAGACCCTGGAACGCTCATATCTCCTCCGCATAAACGGC 37985 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || | ||||| || || || |||| ||||| || ||| | || || |||||| | Sbjct 37984 AAGATTGCTGAGCGTCCACAACACATGCTCATGCGTGTAGCCGTTGGCATCCACGGCGAA 37925 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| ||| | | | | | || ||||| |||| | || || Sbjct 37924 GACATCGAGAAGGCCATCGAGACATACAACTACATGTCCAACAAATACTTCACACACGCG 37865 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 | || || || |||||||| || || || ||||||||||| || || ||||| || Sbjct 37864 TCTCCAACGCTTTTCAACGCCGGAACACCCAACCCACAGATGTCCTCCTGCTTCCTCATC 37805 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | ||||| ||| |||| || || | ||||| || ||| || || | ||| Sbjct 37804 GATATCAAGGATGACAGCATCGAAGGCATCTACGACACGCTGAAGACGTGCGCTATGATC 37745 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || ||| || || || || ||| ||| || | | ||||||| || || ||| Sbjct 37744 TCCAAGACCGCTGGCGGTATTGGTCTCAATGTTCATCGCATCCGTGCCACCGGCTCATAC 37685 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| | || || || || || |||||||||||| |||||||||| || |||| |||||| Sbjct 37684 ATCGGTGGAACGAACGGAACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACAAC 37625 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || || || ||||||||||| | | | ||| ||||||| |||| ||| Sbjct 37624 ACCGCTCGTTATGTCGACCAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTC 37565 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 ||||| |||||||| || || | ||| | || || || |||||||| ||||| || Sbjct 37564 GAGCCATGGCACGCCGATGTCTTTGGCTTCCTTGATCTTCGCAAGAACCATGGCAAGGA- 37506 Query 94255 CTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAA 94311 |||| | ||| | || | ||||||||||| ||| | || ||||| || ||||| Sbjct 37505 --AGAGATCCGCGCCCGTGATTTGTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAG 37448 Query 94312 CGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCC 94371 || ||| || | || | |||| |||||| || || || ||| || || || || Sbjct 37447 CGGGTCCAGGATAATGGAGAGTGGACTCTTTTCTGCCCGAACGAAGCCCCTGGGTTGGCC 37388 Query 94372 GACGTTTGTGG-ATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGG 94429 ||||| | ||| || | || || || ||||| || || | |||| | || Sbjct 37387 GACGTCTATGGCGACGAG-TTCGAGGAGCTGTATCACAAGTATGAGGCCGAGGGACGCGG 37329 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | | || | || || |||||| ||| | ||| | || | ||| |||| Sbjct 37328 AC-GAGAGACTGTGCGCGCCCAGAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGA 37270 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 | || | || || || | | |||||| | |||| ||| ||||||| || ||| Sbjct 37269 CTGGAAACCCGTATATGCTCTACAAGGATGCATGCAACCGCAAAAGCAACCAGAAGAACC 37210 Query 94550 TCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACG 94609 |||| || ||||| || || ||||||||||| | ||||| || | || || | Sbjct 37209 TCGGAACTATTCGCAGCTCTAACCTCTGCACCGAGATCATTGAGTACACCGCACCCGATG 37150 Query 94610 AGATTGCTGTGTGTAACCTGGGCTC 94634 || |||| || || ||| ||| ||| Sbjct 37149 AGGTTGCCGTCTGCAACTTGGCCTC 37125 Score = 127 bits (140), Expect = 2e-24 Identities = 201/287 (70%), Gaps = 6/287 (2%) Strand=Plus/Minus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| |||||||||| ||||||||||| || |||||||| | || || |||||| |||| Sbjct 36682 AACTCGCTGCTTGTTGCCCCCATGCCTACTGCCTCCACATCCCAAATTCTTGGCTACAAT 36623 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 || | |||||||| | ||||||||| | ||| | | || || | ||||| || ||| Sbjct 36622 GAATGCTTCGAACCATATACCTCCAACATCTACTCCCGCCGTGTTTTGGCCGGCGAGTTC 36563 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAG 95268 | ||| ||||| ||||| ||| || |||| ||||| |||||| Sbjct 36562 CAGGTCGTCAACCCCTGGCTCCTGAAGGATTTGGTTGACATGGGCCTGTGGTCTGACAAC 36503 Query 95269 GTCAAGAACCAACTGCTACGCGCCAA---CGGCTCCGTCCAGAACATCCCGCAAATACCG 95325 | ||||||| | | |||| | || ||| |||||| || || | || || Sbjct 36502 ATGAAGAACCGCATCAT---CGCCGATGGTGGTTCCATCCAGAGGATTCCTAACATTCCC 36446 Query 95326 GAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 || || ||||||||||| ||||||||||||||||| ||| | ||||| Sbjct 36445 GATGAAATCAAGGCGCTATACAAGACCGTGTGGGAAATCTCCCAGCG 36399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494718493945560