Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq634 168 7e-37
seq46 132 5e-26
seq412 120 3e-22
>seq634
Length=211807
Score = 168 bits (186), Expect = 7e-37
Identities = 564/867 (65%), Gaps = 17/867 (2%)
Strand=Plus/Plus
Query 153597 GCAATAGACGCCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCG 153656
|||| || |||| || |||||||| ||| |||| || |||||| | |||||||
Sbjct 37119 GCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCG 37178
Query 153657 GCGCAGAGGTT---GCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTG 153713
| ||||||||| ||||| | | || | || | ||| ||||||||||| |||
Sbjct 37179 GTGCAGAGGTTAGAGCTGCGAATAGTTCCG---AGGTTCTTCTGGTTGCTTTTGCGGTTG 37235
Query 153714 CACGCGTCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAAC 153773
|| || || ||| ||||||| ||||| || |||||| || | |||| ||| |
Sbjct 37236 CATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGG-C 37294
Query 153774 CTATGC-AGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTC 153832
|| || | ||| || ||||| || || ||| |||||| ||| || |
Sbjct 37295 GTACCAGAGCTTCTGGGCGCGCACAGTCTCTCGTCCGCGTCCCTCGGCCTCATACTTGTG 37354
Query 153833 GTACAGTCGCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACA 153892
||||| ||| ||||||||||| ||| |||||| | || || | | ||| ||
Sbjct 37355 ATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCA 37414
Query 153893 CATCAGCGACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAG 153952
| || | |||| | | | | ||| || |||||| || || || | ||| ||
Sbjct 37415 GAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAG 37474
Query 153953 CGCGTACATGAGGTCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTC--AGATTG 154010
||||| | | || || || | || ||| ||| ||| | | || | ||||
Sbjct 37475 AGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTTGCC-ATGGTTC-TTGCGAAGATCA 37532
Query 154011 AGCACGCTATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGC 154070
|| | || | ||| ||||||||||| || || | ||||| ||| | |||||| |||
Sbjct 37533 AGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGC 37592
Query 154071 TTT---CCGCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCC 154127
|| || ||||| ||||| | || | | ||||| |||| || | ||| ||
Sbjct 37593 TTATTGCCACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATG 37652
Query 154128 AGGCCGCTTGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGC 154187
|||||| | | || ||||| || | ||| | |||| ||| || | ||||
Sbjct 37653 AGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGA 37712
Query 154188 ACGTTAACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCA-GTCGCCCAGCGTCCT 154246
|| || | ||||| ||||| || ||| || || |||||| ||| | |||||
Sbjct 37713 ACATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTC-AGCGTGTC 37771
Query 154247 GTAGATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGG 154306
||||||||| |||||||| || || || ||| | ||| || || |||| || ||
Sbjct 37772 GTAGATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGG 37831
Query 154307 AATGCGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCAT 154366
|| | ||||| || || || || ||| |||||| || || ||| | | |||
Sbjct 37832 GTTGGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACAT 37891
Query 154367 CATGCGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCG 154426
| ||| || |||||||| | ||||| || |||||||| ||||| | || || ||
Sbjct 37892 GTAGTTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACG 37951
Query 154427 CATGAGCATGTGCTGCGGACGTTCGGC 154453
|||||||||||| || ||||| || ||
Sbjct 37952 CATGAGCATGTGTTGTGGACGCTCAGC 37978
>seq46
Length=404262
Score = 132 bits (146), Expect = 5e-26
Identities = 302/451 (67%), Gaps = 25/451 (6%)
Strand=Plus/Plus
Query 52398 CGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTTGCCGCCATC 52457
||| | || ||||||||| || || ||| | || || ||||| ||| || |||||
Sbjct 337642 CGCCTCGTTGCCTTCGCCGCCGTAGAAGGCATCTTCTTCTCCGGTTCCTTCGCGTCCATC 337701
Query 52458 TTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAGTTGATATCG 52517
|| | | || | | ||| | ||||||||||| || ||| |||||| | |||||
Sbjct 337702 TTCTGGTTGAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAACTCATATCT 337761
Query 52518 CGCGACGAAGGACTGCACACGGACTTTGCGTGCCT---CTACTA------CAAGACGCG- 52567
|| ||||| || ||||||| ||||| |||||||| || || ||| || ||
Sbjct 337762 CGTGACGAGGGCATGCACACCGACTTCGCGTGCCTACTCTTCTCTCTCCTCAACACACGT 337821
Query 52568 -CGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCGGTGGCTA 52626
||| || |||| ||| | ||| | ||| ||| || || || | |
Sbjct 337822 CCGT---CGCAAAA--GGA-----AGTCGAGGC----CATCATCACCGAAGCTGTCACCA 337867
Query 52627 TCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGCAGT 52686
|||| | ||||| | || | || || ||| | || || ||||||||| | ||
Sbjct 337868 TCGAGCAAGAGTTCCTCACAGAAGCTCTACCGTGTGCTCTTCTCGGCATGAACTCCAAGC 337927
Query 52687 CCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGCCAA 52746
||||||| ||||||||||||| || || || || ||| | || ||||| | | ||
Sbjct 337928 TCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTCTTGGCTCTCGGCAACCAAA 337987
Query 52747 AGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGA 52806
||| || |||||| ||| || || || || ||| | ||||| ||||| | || ||||
Sbjct 337988 AGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGTAAGA 338047
Query 52807 CCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
| ||||| ||||||||| | ||||| || ||
Sbjct 338048 CAAACTTCTTCGAGAAGAGGGTCGGTGATTA 338078
>seq412
Length=249799
Score = 120 bits (132), Expect = 3e-22
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
|| ||||||| ||||| ||| || || | | | ||||| || || |||||||||||| |
Sbjct 4300 CCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4359
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || || || || || || |||| |||| |||||||| || ||||| ||
Sbjct 4360 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 4419
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTGTTCCACGGTGTCGGTCGACTCCA 138565
|| || || || || ||| |||||| ||| | ||| || | ||| |||| ||||||||
Sbjct 4420 ATGCCCTCCTTATC-CTGAATTTTTGATTTGACGTTG-TCGATGGTATCGGACGACTCCA 4477
Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|||||| || | || || || ||||| || || || || ||||||||
Sbjct 4478 CCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447
||||| || | ||| | || || || | | |||||||| || |||||||||||
Sbjct 4072 CCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 4131
Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507
| || || |||||| | || ||||| | | |||| ||||| || |||||||| ||
Sbjct 4132 AGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGA 4191
Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567
||||| ||||| || ||| || || | | || | ||||||| |||||| |||
Sbjct 4192 ATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACC 4251
Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614
|| | ||| | ||| || || || || || || || || ||||||||
Sbjct 4252 TCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496257679303920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |