Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq634 251 9e-62
seq46 138 1e-27
>seq634
Length=211807
Score = 251 bits (278), Expect = 9e-62
Identities = 1121/1747 (64%), Gaps = 29/1747 (2%)
Strand=Plus/Plus
Query 115548 GGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATG 115607
|||| ||| |||||||||||| | || |||||||| || ||||||| | | ||
Sbjct 36236 GGCCATTGTTCGGAGGTAGTAGAGGCCGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTG 36295
Query 115608 CATTGAGGACAACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 115667
||| || | | |||| | || || | |||| | ||| | ||||| ||
Sbjct 36296 CATCGATGTAATCTTGCCCATGGTAGGCTCCTTCATGTGAATGTTGAGCGACTGGGACTG 36355
Query 115668 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTC 115724
|||||||||| || || || || ||||| | ||| | | | | || | |||||
Sbjct 36356 ATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATGA--TGGTACG-CTGGGAGATTTC 36412
Query 115725 CCACACAGTTCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGA 115784
|||||| || |||| || ||| || ||||| || || | || | ||||| ||
Sbjct 36413 CCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATGTTAGGAATCCTCTGGATGGA 36472
Query 115785 GCCACCTGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAG 115844
||||| | || ||| | | |||||| | | ||||| || || || | |
Sbjct 36473 ACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGGCCCATGTCAACCAA 36532
Query 115845 ATCCTCCACGAGGTGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATA 115904
||||| || ||| ||||| || ||||| || || | || | ||
Sbjct 36533 ATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCCGGCCAAAACACGGCGGGAGTA 36592
Query 115905 GATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGG 115963
|||||||| || ||||| || ||||| ||||||| | |||||| |||||| ||||||||
Sbjct 36593 GATGTTGGAGGTATATGGTTCGAAGCATTCATTGT-AGCCAAGAATTTGGGATGTGGAGG 36651
Query 115964 CTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCT 116023
| || |||||||| || | || || |||||| | ||| | || | |||
Sbjct 36652 CAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACCATGCTGTGCGATCTTTGCCT 36711
Query 116024 TGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGA 116083
|||| || |||||||| || | | | | | |||||||||| | || || |
Sbjct 36712 TGAGAGCATCCCAGTCCCAGAGGTCGGTGGGCGTGATATTCCACATATCATATTGAAGTA 36771
Query 116084 TACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT 116143
| || || || | || || ||||| | || |||||||| || ||| |||| |
Sbjct 36772 TGCCCTGCGAGACAGGAGAGCCCTCGTAAGTTTCATATGGACCAAGTTCCTTGGCCAGAT 36831
Query 116144 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCAT-TGCC 116202
|| | || ||| || ||||| || || |||||||| || | | || | | ||
Sbjct 36832 CGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCTTCC 36891
Query 116203 TTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGG 116262
||| | ||| || || || | || || | || ||||||| ||||| |||
Sbjct 36892 TTG-CTTCGGGAGAGTCGAAGGGCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCCTGG 36950
Query 116263 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAA 116322
|| || || || | || | ||||| | || || ||||| || || ||
Sbjct 36951 ACTCCAAGACCGACAGGCCTGTGTCTGAAGTTGCTGTTGCGAGCTTCAGGAACCGGGTAG 37010
Query 116323 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 116382
||| ||||||| | | || ||||| ||||| |||| || ||| || |||
Sbjct 37011 TGATTGACCTCGATAATCTTGTTCAGATTACGAGTGACGACCTGGACGACTTCGTGGAGC 37070
Query 116383 TTTTCGTAATCAAAACTGCGA-GTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGC 116441
|| | | ||||| | || | || | | | |||||| ||| || || | || ||
Sbjct 37071 TTCTGGAAATCATACTCGCCACGTTGCATG-TCCACATACGCAGGGAGTGCAAGCGAGGC 37129
Query 116442 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATT 116501
|| || || || | |||||| | |||||||| || || || || || | ||
Sbjct 37130 CAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTT 37189
Query 116502 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGT 116560
|| || ||| || || | |||||| || || | |||| | || || ||||||||||
Sbjct 37190 AGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTT-GCTTTTGCGGTTGCATGCATCCTTGT 37248
Query 116561 AGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCG 116619
|||||||||| || | || ||||| || |||| || ||| || || | ||| | | ||
Sbjct 37249 AGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTCT 37308
Query 116620 GCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG-TAGAGGGCCTC 116678
| ||| ||||||| | | || ||||| |||| ||| ||||| || || ||||
Sbjct 37309 G-GGCGCGCACAGTCTCTCGTCCGCGTCCCTCGGCCTCATAC-TTGTGATACAGCTCCTC 37366
Query 116679 AAACTCTTCACCCACAG-CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACC 116737
||||| || ||| || | || | | ||| || || | | || ||||| |||| ||
Sbjct 37367 GAACTCGTC-GCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTCC 37425
Query 116738 ATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGA 116797
| | ||| |||| |||||||||||||||||||| || ||||| || || |||| |
Sbjct 37426 ACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACA 37485
Query 116798 GATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGA 116857
||| || ||| ||||| | || || || || | || | ||| | | ||
Sbjct 37486 AATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGA 37545
Query 116858 TATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCT 116914
||| |||||||| || || ||||| | |||| | || ||| | ||| |||
Sbjct 37546 CATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCT 37605
Query 116915 GGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATT 116974
||| ||||| | || || |||| | || |||||||| || |||| || | ||
Sbjct 37606 GGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGACG 37665
Query 116975 GGCCATTTG-TCCCCCGA-ATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACC 117032
|| || | ||| |||| || ||| | | |||| | || || | | | |||
Sbjct 37666 TTCCGTTCGTTCCACCGATGTATGAGCC--GGTGGCACGGATGCGATGAACATTGAGACC 37723
Query 117033 AATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATC 117092
|||||| || || ||| ||||| |||||| | | || || ||||||| || ||
Sbjct 37724 AATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTC 37783
Query 117093 GATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACC 117152
||| |||| |||| | |||||||||||||| ||||| ||||| | ||||| ||
Sbjct 37784 GATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCC 37843
Query 117153 AGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGG 117211
|||||||| || ||||| | |||||| |||| || | | |||||| | | ||| |
Sbjct 37844 GGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAA-GTATTTGTTGGACATGTAGTTGTATG 37902
Query 117212 TCTCCAAGACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGT 117271
|||| | | | |||||||| ||||| || || | | || ||||| | |||||
Sbjct 37903 TCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCATGAGCATGT 37962
Query 117272 ATTGGGG 117278
||| ||
Sbjct 37963 GTTGTGG 37969
>seq46
Length=404262
Score = 138 bits (152), Expect = 1e-27
Identities = 309/455 (68%), Gaps = 12/455 (3%)
Strand=Plus/Minus
Query 127231 GTAGTCCCCGACCCGCTTCTCGAAGAAGTTTGTCTTCCCATCGAGGCTGATATTCTCCAT 127290
||| || ||||||| ||||||||||||||||||||| || | || ||| ||||||||
Sbjct 338079 GTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTCCAT 338020
Query 127291 AAAATCAAATGGGTTCTTTGAGTTCCA-AATTGTTGGCACCCCA-ATCTGTTTGAGGAGA 127348
|| || || ||||| | | ||| | || | |||| || | | | ||| ||
Sbjct 338019 GAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGAGAGCCAA--GAGCAGG 337962
Query 127349 CGATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTA 127408
|| || | |||| |||| ||||||| |||| || |||||||| |||| || |
Sbjct 337961 CGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAGAGCA 337902
Query 127409 CATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGTACGATGGCG 127468
|| || || || || || |||| | | ||| ||| |||||||| | ||||||
Sbjct 337901 CACGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGATGGCC 337842
Query 127469 T-GAATAG--TGTCCACCCCAGGTCTATTGCGTAAAGTCTTGAAGAGTTC-CACAGCAAA 127524
| || | | | | | | || | ||| | | || ||||||| ||| || ||
Sbjct 337841 TCGACTTCCTTTTGCGACGGACGTGTGTTGAGGAGAGA---GAAGAGTAGGCAC-GCGAA 337786
Query 127525 CTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCAT 127584
|| ||| | ||||||||||| || |||||||| || |||||| || || |||||
Sbjct 337785 GTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCAT 337726
Query 127585 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTC 127644
||| || ||||||||||||||||| || | || || || ||||||||||| || ||
Sbjct 337725 GAGGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGATGCCTTC 337666
Query 127645 CACACACGCGAACGCAAATAGACGCTCGGCAAAGG 127679
|| ||||| |||| || || | |||||||
Sbjct 337665 TACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGG 337631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613501364012760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |