Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq634 111 3e-19 >seq634 Length=211807 Score = 111 bits (122), Expect = 3e-19 Identities = 327/494 (66%), Gaps = 10/494 (2%) Strand=Plus/Plus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACATGC 203897 || ||| || ||||| ||||| | | || | |||| | ||| || ||||| | || Sbjct 36203 CTGGTCGACGGTGAATTGAATAG-GAGCAGAGGCGGCCATTGTTCGGAGGTAGTAGAGGC 36261 Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957 ||||||| || || || ||| ||| | |||||| || | | |||| || | | | Sbjct 36262 CGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTGCATCGATGTAATCTTGCCCATGGTAG 36321 Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016 | || |||||||||||| || |||||| || |||||| |||||||| || || ||| Sbjct 36322 GCTCCTTCATGTGAATGTTGAGCGACTGGGACTGATCGATG-AAGGCGCCACGGTCAGCG 36380 Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075 ||||| | || ||||| ||| || || |||||||| |||||| | | || || || | Sbjct 36381 GCCATCTGAATGATGGTACGCTGGGAGATTTCCCACACGGTCTTGTATAGCGCCT-TGAT 36439 Query 204076 GTGTTGAGGCACATCTTCCCA--CGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133 | | || || || | | || ||| || || ||||| || | | || Sbjct 36440 TTCATCGGG--AATGTTAGGAATCCTCTGGATGGAACCACCATCGGCGATGATGCGGTTC 36497 Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193 || | | || ||||| ||||| | || ||| || || |||||||| | Sbjct 36498 TTCATGTTGTCAGACCACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACG 36557 Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253 | ||| || || |||| || || | |||| | | | |||| ||| |||||||||| Sbjct 36558 ACCTGGAACTCGCCGGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAG 36617 Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313 || |||| ||| | ||| || | ||| ||| || |||||||| || | ||||| Sbjct 36618 CATTCATTGTAGCCAAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGC 36677 Query 204314 GAGTTGCGCACACC 204327 |||||||| ||||| Sbjct 36678 GAGTTGCGAACACC 36691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795147636086160