Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq634 111 3e-19
>seq634
Length=211807
Score = 111 bits (122), Expect = 3e-19
Identities = 327/494 (66%), Gaps = 10/494 (2%)
Strand=Plus/Plus
Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCC-TGCTTCTCAGATAGTACATGC 203897
|| ||| || ||||| ||||| | | || | |||| | ||| || ||||| | ||
Sbjct 36203 CTGGTCGACGGTGAATTGAATAG-GAGCAGAGGCGGCCATTGTTCGGAGGTAGTAGAGGC 36261
Query 203898 CGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGG 203957
||||||| || || || ||| ||| | |||||| || | | |||| || | | |
Sbjct 36262 CGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTGCATCGATGTAATCTTGCCCATGGTAG 36321
Query 203958 GGTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCG 204016
| || |||||||||||| || |||||| || |||||| |||||||| || || |||
Sbjct 36322 GCTCCTTCATGTGAATGTTGAGCGACTGGGACTGATCGATG-AAGGCGCCACGGTCAGCG 36380
Query 204017 GCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-CGTCTCTGGT 204075
||||| | || ||||| ||| || || |||||||| |||||| | | || || || |
Sbjct 36381 GCCATCTGAATGATGGTACGCTGGGAGATTTCCCACACGGTCTTGTATAGCGCCT-TGAT 36439
Query 204076 GTGTTGAGGCACATCTTCCCA--CGTCCTGATCGAGCCGTTGTCGGCCATCAGTCTCATC 204133
| | || || || | | || ||| || || ||||| || | | ||
Sbjct 36440 TTCATCGGG--AATGTTAGGAATCCTCTGGATGGAACCACCATCGGCGATGATGCGGTTC 36497
Query 204134 CTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATG 204193
|| | | || ||||| ||||| | || ||| || || |||||||| |
Sbjct 36498 TTCATGTTGTCAGACCACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACG 36557
Query 204194 ATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAAC 204253
| ||| || || |||| || || | |||| | | | |||| ||| ||||||||||
Sbjct 36558 ACCTGGAACTCGCCGGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAG 36617
Query 204254 GCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGG 204313
|| |||| ||| | ||| || | ||| ||| || |||||||| || | |||||
Sbjct 36618 CATTCATTGTAGCCAAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGC 36677
Query 204314 GAGTTGCGCACACC 204327
|||||||| |||||
Sbjct 36678 GAGTTGCGAACACC 36691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795147636086160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |