Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq46 215 5e-51
seq412 136 4e-27
seq738 111 2e-19
seq11 102 8e-17
>seq46
Length=404262
Score = 215 bits (238), Expect = 5e-51
Identities = 216/277 (78%), Gaps = 5/277 (2%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
|||||| ||||| | | ||| || |||||||||| | ||||||||| ||| || ||
Sbjct 337466 GTAGGTATCGATCAAGAGCGAGTATGTTTCCGAGTGGATGTTCTCCATCATGATCTGGAA 337407
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAA-CGCTCGACCAGAT 133285
|||||| ||||| ||||||||| ||| ||||| ||| || ||| ||||||||||| |
Sbjct 337406 GCCGTAGAAGCATCGCGCCTCGGGCACTTGCACCTCTCC-GCTAAAGCGCTCGACCAGGT 337348
Query 133286 TTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGC 133345
| |||||||||||||||||| ||||||||| ||||| || ||||| |||||| ||
Sbjct 337347 TCTCGTTGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGAAGC 337288
Query 133346 GCTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCT 133402
|||||| ||||||||| ||| | ||||||| | ||| ||||| || || | ||| |
Sbjct 337287 GCTCGTCGTCGTTCAATCGCTTGTTCCAGTCGTGGAGGTCTTTGGAGAGATCGATCTCTT 337228
Query 133403 CGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
|| |||||||||| || || ||||| || ||||||||
Sbjct 337227 CGGCGGTCCAAAAAGAGGCTTCGGCCTTCTTGTACAT 337191
Score = 187 bits (206), Expect = 2e-42
Identities = 348/505 (69%), Gaps = 16/505 (3%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| || || || || ||| | ||||| || || || || || || ||| || ||| |
Sbjct 338084 TTCTGGTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTC 338025
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720
||| || || |||||||||| | ||||||| ||| | |||||| || | | |
Sbjct 338024 TCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGAG-AG--CCAAG 337968
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780
||||| | |||||| |||||||||||||| || ||||| | | | || | || ||
Sbjct 337967 AGCAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGA 337908
Query 132781 AGACGCAC-CGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839
||| |||| ||| || ||||| ||||| || ||||||||||| ||| || |||||||
Sbjct 337907 AGA-GCACACGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGAT 337849
Query 132840 GATTTCCCTAACGCGC----GCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGC 132895
||| || || | || || || |||| | | ||| | | ||
Sbjct 337848 GATGGCCTCGACTTCCTTTTGCGACGGACGTGTGTTG----AGGAGAGAGAAGAGTAGGC 337793
Query 132896 AAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGC 132955
| || |||||| |||| ||||||||| | || |||||||||||| ||| || | ||
Sbjct 337792 ACGCGAAGTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGC 337733
Query 132956 CGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGA 133015
|||||||||||||||| || || | ||| || |||| ||||| || || |||||||
Sbjct 337732 CGGGCATGAGGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGA 337673
Query 133016 CGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCTGGCGA 133075
||| || ||||| ||||| || || ||||| | | || || | | |||| | ||
Sbjct 337672 TGCCTTCTACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGGTCGAGTTTTTGTCTGAGA 337613
Query 133076 TCCAGCGCAGCGCCCATTCGGCCTT 133100
|||| || || ||||| ||||||||
Sbjct 337612 TCCACCGGAGAGCCCAGTCGGCCTT 337588
>seq412
Length=249799
Score = 136 bits (150), Expect = 4e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 38243 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCAC 38302
|||||| || ||||| || || || || ||||| || |||||| |||| || ||| | |
Sbjct 4527 AATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTC 4468
Query 38303 CGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
||| | | | | |||| | ||| |||||| | || || ||||| |||||| | || |
Sbjct 4467 CGATACCATCGACAACG-TCAAATCAAAAATTCAGGATAAGGAGGGCATTCCCCCGGATC 4409
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||| ||||| ||||| || || | |||||||| ||||||||
Sbjct 4408 AGCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACA 4349
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| || || | || || || ||||| |||||| || |||| ||
Sbjct 4348 ACATCCAGAAAGAGTCCACCCTCCACTTGGTTCTGCGTCTGCGAGGTGG 4300
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| || ||||| | || || ||| | ||
Sbjct 4298 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGACGATCACGCTAGAGGTTGAGTCGTCC 4239
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | |||| | || || |||| || |||||||| |||||| | |||||
Sbjct 4238 GACACAATCGACAACG-TGAAGTCCAAGATCCAGGATAAAGAGGGTATTCCCCCGGACCA 4180
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
|| || ||||| | || || || ||| |||| |||| || || ||| ||||||||
Sbjct 4179 GCAACGTCTCATCTTTGCTGGTAAGCAGTTGGAGGACGGCCGAACGCTCTCGGACTACAA 4120
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| |||| ||||| |||||||| ||| | | |||||
Sbjct 4119 CATCCAGAAGGAGTCGACTCTGCACTTGGTGCTCCGTCTCCGTGGCGG 4072
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/195 (71%), Gaps = 2/195 (1%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| || || ||||| ||| | || ||||| | | ||| | | | | |||| | |||
Sbjct 4732 TCACCGGTAAGACCATTACCCTTGAGGTCGAATCGAGCGATACCATCGACAACG-TCAAA 4674
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
|| |||| || || ||||| || ||| | ||||||||||| | || | ||| |||
Sbjct 4673 TCGAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAACAGCGATTGATCTTCGCCGGC 4614
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTG 38444
|| ||||| || || | |||||||| |||||||||||| || ||||| | |||||
Sbjct 4613 AAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACGCTC 4554
Query 38445 CATTTGGTGCTGCGT 38459
||| | || || |||
Sbjct 4553 CATCTCGTCCTCCGT 4539
Score = 91.5 bits (100), Expect = 1e-13
Identities = 141/196 (72%), Gaps = 4/196 (2%)
Strand=Plus/Minus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACA-GCGTGCAAACGCTTAAA 38324
|||| ||||| ||||||||| | || || ||| || | |||| | || || | | ||
Sbjct 5015 TCACCGGCAAGACCATCACCTTGGAGGTGGAGTCCTCGGACACGATTGACAATG-TCAAG 4957
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCAACAGCGGCTCATTTACGCGGG 38383
|| |||| || || || || || |||||| ||||||||||| | |||| ||| ||
Sbjct 4956 TCGAAGATCCAGGATAAGGAAGGCAT-CCCGCCTGACCAACAGCGCTTGATTTTCGCAGG 4898
Query 38384 CAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCT 38443
||| ||||| || || | || || || ||||||||||||||| ||||| | || ||
Sbjct 4897 CAAGCAGCTCGAGGATGGACGTACTCTGTCCGACTACAACATCCAGAAGGAGTCAACTCT 4838
Query 38444 GCATTTGGTGCTGCGT 38459
|||| | || || |||
Sbjct 4837 GCATCTCGTCCTTCGT 4822
>seq738
Length=174967
Score = 111 bits (122), Expect = 2e-19
Identities = 105/134 (78%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| |||||| | ||||||||||| | || | ||| ||||| ||||| ||
Sbjct 25362 GACAAGGAGGGCATTCCCCCGGACCAACAGCGTTTGATCTTCGCCGGCAAGCAGCTCGAG 25303
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|| | |||||||| ||||||||||||||| ||||| |||| ||||| ||||||||
Sbjct 25302 GATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACTCTGCACTTGGTGCTC 25243
Query 38457 CGTTTGAGAGGCGG 38470
||| | | |||||
Sbjct 25242 CGTCTCCGTGGCGG 25229
>seq11
Length=137347
Score = 102 bits (112), Expect = 8e-17
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 38337 GACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGAC 38396
||||| ||||| |||||| | ||||||||||| || || | ||| || || ||||| ||
Sbjct 124847 GACAAGGAGGGCATTCCCCCAGACCAACAGCGTCTGATCTTCGCCGGAAAGCAGCTCGAA 124788
Query 38397 GACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTG 38456
|||| ||||||||| ||||||||||||||| ||||| |||| || || | || ||
Sbjct 124787 GACGGCCGCACCCTCTCCGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGTCCTC 124728
Query 38457 CGTTTGAGAGGCGG 38470
||| || | || ||
Sbjct 124727 CGTCTGCGTGGTGG 124714
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500168042106240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |