Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_014765.1
Length=198519
Score E
Sequences producing significant alignments: (Bits) Value
seq235 212 8e-50
seq112 127 3e-24
seq24 122 1e-22
seq712 114 2e-20
seq634 87.8 2e-12
>seq235
Length=294990
Score = 212 bits (234), Expect = 8e-50
Identities = 459/675 (68%), Gaps = 20/675 (3%)
Strand=Plus/Minus
Query 7404 CTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTG-TCGA-AGGAGTCTCGAATCGAA 7461
|||| || ||||||||||| || || | || |||||| | || | || | | || ||
Sbjct 28073 CTTTTTTGTGTTTACGTTTGAATTCGTTAGTGAAGTGGTTGACAAGACGGTTG--TCAAA 28016
Query 7462 ATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC 7521
|| || || ||||| ||||| || || ||||||| ||||| || |||||||| | ||
Sbjct 28015 GTCCTCTCCTCCCAAATGTGTGTCACCGGCGGTCGACTTGACCTCGAAGATACCCTCCTC 27956
Query 7522 AATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CG 7580
||| | | || || ||||| || |||||||| || || || || ||||| ||||| ||
Sbjct 27955 AATTGTGAGCAGAGACACATCGAAGGTACCACCTCCGAGATCGAAGATGAGCACGTTGCG 27896
Query 7581 TATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAA 7640
| ||| | | ||||| || |||||||| || || || || || || || || ||||
Sbjct 27895 T-TCGCCAGTAGTCTTCTTGTCAAGACCGTAGGCAATGGCAGCGGCAGTGGGCTCGTTAA 27837
Query 7641 TAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCG 7700
| || || || ||||||||||||||| | ||||| || || || || || || |
Sbjct 27836 TGATTCGGAGCACGTTCAGGCCAGCAATCAGACCAGCATCCTTGGTAGCCTGGCGCTGAG 27777
Query 7701 AATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACG 7760
| ||||| |||||||| ||||| || ||||| |||| | || | || || || |
Sbjct 27776 AGTCGTTGAAGTAGGCAGGGACGGTGACGACAGCGTTGTTCACGGTGCCGCCAAGGTATG 27717
Query 7761 ATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACT 7820
| || || | || |||| || |||||||| ||||| ||||| || | | ||
Sbjct 27716 ACTCGGCCGTTTCCCTCATCTTCACGAGAACCATGGATGAGATCTCCTCGGGTGTGAA-A 27658
Query 7821 GTTTCGT-TTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACC---GGGG 7876
|| | || || || || || || || | || | || || || |||| | |
Sbjct 27657 GTCTTGTCCTCTCCCTTGAACTCGACCTGGATGACTGGCTT----GC--CACCCTTGTCG 27604
Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936
|| ||||| | | | | ||||| ||| | || |||| ||| | ||||| |
Sbjct 27603 ATGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGCACCTCAGCGTCGGCGAACTTGCGG 27544
Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996
|| || |||||||| ||||| || || ||||| ||||||||| || ||||||||||
Sbjct 27543 CCAATGAGACGCTTGGCATCGAAGACAGTGTTGGCGGGGTTCATAGCGACTTGGTTCTTC 27484
Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056
|| | ||| ||||| ||||| || || || || || || ||| | ||||| ||
Sbjct 27483 GCAGAGTCTCCGATGAGACGCTCCGTA---TCGGTGAAGGCCACGAAACTCGGGGTGGTG 27427
Query 8057 CGATTCCCTTGGTCG 8071
|| || || ||||||
Sbjct 27426 CGGTTACCCTGGTCG 27412
Score = 167 bits (184), Expect = 3e-36
Identities = 538/829 (65%), Gaps = 7/829 (1%)
Strand=Plus/Minus
Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628
||||| ||| | || ||||| || || || | ||| ||||| || || || ||
Sbjct 28969 TCATCCTCAGCCTTGTACTTCTCGGCTTCCGCCAACATGCGCTCAATCTCCTCCTTGGAC 28910
Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688
| | ||||| || || || || |||||| | || || || | |||| || |
Sbjct 28909 AGACGGCCCTTGTCGTTGGTGATGACAATCTTGTTGGTCTTTCCGGTACCCTTCTCGAGA 28850
Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748
||| || ||| || || || ||||||| |||||| | || | ||| || || |
Sbjct 28849 GCAGAGACGCTCATGATGCCGTTAGCATCAAGATCGAAGGTGACCTCAATCTGGGGAACA 28790
Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808
|| | ||| || | ||| || || || | || ||| | || | | |||| ||| |
Sbjct 28789 CCACGCGGCGCAGGTGGGATGCCAGTGAGCTCGAATTTGCCCATGAGGTTGTTGTCCTTG 28730
Query 6809 GCCTTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTG 6866
| ||| | ||| ||||| || ||||| | ||| ||| | || || || ||
Sbjct 28729 G--TTCGTGCACGCTCACCCTCGTAGACCTGAATGAGCACACCGGGCTGGTTGTCGCTGA 28672
Query 6867 CCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGG 6926
|| ||||||| | | ||||| | ||||| || || || | | || | || |
Sbjct 28671 AGGTGGAGAAGACCTCTGACTTCTTCGTGGGAATGGTGGTGTTGCGCTTGATCAGAGGAG 28612
Query 6927 TCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACA 6986
|||| | |||||| || || | ||||| |||| || | |||||||| || || |
Sbjct 28611 TCATGACACCACCAGCGGTCTCAATACCAAGGGACAATGGGGCGACGTCCAAAAGCAAGA 28552
Query 6987 GGTCTTGAACAGA-TTCGTTCCCTTCAC-CCGTTAAGA-TGGCGGCTTGGACCGTCGCCC 7043
|| | || || | | | ||| |||| | || || ||||| | || |
Sbjct 28551 TCTCGTTGGTGGACTTGGAGGAGGTGTCGCCGGAAAGAATAGCAGCCTGGACGGCAGCAC 28492
Query 7044 CGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAAT 7103
|||| || || |||||||||||||| || | || || | || || ||||| || | |
Sbjct 28491 CGTAGGCAACAGCCTCATCGGGGTTGATGGACTTGTTGGGCTCCTTGCCGTTGAAGAAGT 28432
Query 7104 CCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163
| || | ||| | || || || ||||| || || ||||| |||||||||||||| || |
Sbjct 28431 CGGAGACCATCTTCTGGATCTTGGGGATACGGGTGGATCCTCCGACCAAAACGATCTCGT 28372
Query 7164 TCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATT 7223
|| || || |||||||| | ||| || || ||||| ||||||||
Sbjct 28371 GAACGGAAGACTTGTCGATCTTGGCGTCGCGGAGGACACGCTCGACTGGTTCCATGGTGG 28312
Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283
||||| | |||| || || || || || | |||||||| ||||| |||||||| |
Sbjct 28311 ATCGGAAGAGGTCCTGGCAGAGCTCTTCGAACCTAGCACGGGTGATGGAGGTATAGAAGT 28252
Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343
||| || ||| | | ||| || || || |||| || || || | || || || || |
Sbjct 28251 CAATTCCTTCGAAGAGCGAGTCGATCTCGATGGACGTCTGAGCAGAGGAGGACAAGGTAC 28192
Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTT 7392
|||| || ||||| || || ||||| | ||| || |||||||| | |||
Sbjct 28191 GCTTGGCCCGCTCGCATGCGGTTCGGAGACGTCGGAGGGCACGGGCGTT 28143
>seq112
Length=657780
Score = 127 bits (140), Expect = 3e-24
Identities = 224/324 (69%), Gaps = 3/324 (1%)
Strand=Plus/Plus
Query 7435 GAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGT 7494
|||||| ||| || | | ||||||||||| |||||||| || || || || |||||
Sbjct 111690 GAAGTGGTCAAGAAGGTTGGTATCGAAATCTTGACCACCCAGATGAGTGTCACCAGCGGT 111749
Query 7495 CGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACC 7554
|| ||||| |||| ||| || | |||| | | || ||||| || ||||||||
Sbjct 111750 AGCCTTGACAGTGAAGACACCACCCTGGATGTGAAGAAGGGACACATCGAAAGTACCACC 111809
Query 7555 ACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTT--CTTAT-CGAGACCGTA 7611
|||| || | ||||| || ||| | || | || || | || | ||||||||
Sbjct 111810 TCCCAAATCGTAGATGAGAACATTCCTCTCCTTCTCAGACTTGCCGGATCCAAGACCGTA 111869
Query 7612 CGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGT 7671
||||| || || || || || || || |||||||| || ||| ||||| ||||| |
Sbjct 111870 TGCGATGGCGGCGGCGGTAGGCTCGTTGATAATACGGAGGACGTTGAGGCCGGCAATGGC 111929
Query 7672 TGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGAC 7731
| ||||| || || |||||||| || ||||| || ||||| || || || || ||
Sbjct 111930 ACCGGCATCCTTGGTGGCTTGTCGCTGGTTGTCGTTGAAATAGGCGGGAACTGTGACAAC 111989
Query 7732 CGCGTCCGTGACTTTCTTACCGAG 7755
|| | | ||| ||||| |||||
Sbjct 111990 GGCCTTCTCGACCTTCTTGCCGAG 112013
>seq24
Length=408599
Score = 122 bits (134), Expect = 1e-22
Identities = 244/359 (68%), Gaps = 6/359 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||||||||||||||| | || || || || ||||| | || ||| || || | ||
Sbjct 326339 TCGAAATCTTCACCACCGAGATGGGTGTCACCAGCGGTAGATTGGACCTCGAACACGCCG 326280
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA---AATGAGT 7573
|||||||| | | | || ||||| || || ||||| || || || | ||||| |
Sbjct 326279 TCTTCAATGGTCAGGATGGAGACATCGAAAGTTCCACCTCCGAGATCGTAGACAATGACT 326220
Query 7574 A--CGTTCG-TATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630
|| ||| | | |||| | | |||| ||||| || || || | || ||||| ||
Sbjct 326219 TGGCGCTCGCTCTTGTCGGTCTCGGTCTTGTCGAGGCCATAAGCCAGGGCGGCCGCGGTG 326160
Query 7631 GGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCT 7690
|| || || | | ||| ||| || || || || || || | || || || || ||
Sbjct 326159 GGCTCGTTGACCACACGGAGAACATTGAGACCGGCGATGGTGCCAGCGTCCTTGGTGGCG 326100
Query 7691 TGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTA 7750
|| || | ||||| ||||||||||| ||||| || || |||| | |||| ||| |
Sbjct 326099 GCACGCTGAGCGTCGTTGAAGTAGGCCGGAACCGTAACAACGGCGTTCTTGACCGTCTCA 326040
Query 7751 CCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTC 7809
|||||||| || |||| || ||||| ||| | |||||| | |||||||| ||
Sbjct 326039 CCGAGATAGCTCTCGGCGACCTCCTTCATCTTGCCCAAAACCATGGCGGAAATCTCCTC 325981
>seq712
Length=182452
Score = 114 bits (126), Expect = 2e-20
Identities = 224/327 (69%), Gaps = 8/327 (2%)
Strand=Plus/Minus
Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516
||||||||||||||||| | || || || || ||| | ||||| || |||| |||
Sbjct 54126 TCGAAATCTTCACCACCGAGATGGGTGTCGCCGTTGGTGGACTTGACCTCGAAGACACCG 54067
Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576
||| || | | | || | |||||| |||||||| || || || | | || |
Sbjct 54066 GCTTGGATCTCAAGAATGGAGATATCAAAGGTACCACCTCCGAGATCGTAGAC-AGCAA- 54009
Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636
| ||| ||| || ||| ||||||||||| || | ||| || || || || ||
Sbjct 54008 ----TGACGTTGTCGCTGGACTTGTCGAGACCGTAGGCAAGAGCGGCTGCGGTCGGCTCG 53953
Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTCG 7695
|||| | |||||| ||| || || || || | ||| || || || || ||||| ||
Sbjct 53952 TTAACCACACGAAGGACGTTGAGACCGGCGAT-CTGGCCGGCGTCCTTGGTAGCTTGACG 53894
Query 7696 TTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAG 7755
|| || ||||| |||||||| ||||| || ||||| |||| | |||| ||||| || |
Sbjct 53893 CTGAGAGTCGTTGAAGTAGGCGGGGACAGTGACGACGGCGTTCTTGACGTTCTTGCCCAT 53834
Query 7756 ATACGATTCCGCGATATCTTTCATTTT 7782
|| | || ||| | || ||||| ||
Sbjct 53833 GTAGGCCTCGGCGGTCTCCTTCATCTT 53807
>seq634
Length=211807
Score = 87.8 bits (96), Expect = 2e-12
Identities = 271/419 (65%), Gaps = 3/419 (1%)
Strand=Plus/Plus
Query 105562 ACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTCGCC 105621
|| || |||||||| | || |||||||||| || | || | || || | |
Sbjct 37443 ACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGATC 37502
Query 105622 TCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCATGGT 105681
||||| | || || ||| |||| || || || | | | |||||||||||||||
Sbjct 37503 TCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGTGCCATGGC 37562
Query 105682 TCTAAATAGACTGCAATAGACCCTTTACG---ACGCCCCGCTTGATTGACATATCTTGCG 105738
|| | |||| || | || ||| || | || | || | |||||| | |||
Sbjct 37563 TCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTGGTCGACATAACGAGCG 37622
Query 105739 GTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTTCCACGA 105798
|| |||||| || || | ||| || || | || | ||| ||||| || |||||||
Sbjct 37623 GTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCG 37682
Query 105799 ATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCCCACTTA 105858
|| | ||| | ||||| | ||||| | | |||||||| ||||| |||
Sbjct 37683 ATGTATGAGCCGGTGGCACGGATGCGATGAACATTGAGACCAATACCGCCAGCGGTCTTG 37742
Query 105859 CTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCCTTATTC 105918
||| || ||| || | || ||||| || || ||||| || || ||||| |
Sbjct 37743 GAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATA 37802
Query 105919 GCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGAGTTGG 105977
| || ||||| || || ||||| ||||| ||||||| || || ||||| || |||||
Sbjct 37803 TCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGG 37861
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 635126758299240
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