Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq634 277 2e-69
seq46 105 8e-18
seq390 100 4e-16
>seq634
Length=211807
Score = 277 bits (306), Expect = 2e-69
Identities = 1130/1750 (65%), Gaps = 37/1750 (2%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
||||| ||||| ||||||| || || | || ||||| || ||||| || || |
Sbjct 37969 CCACAACACATGCTCATGCGTGTAGCCGTTGGCATCCACGGCGAAGACATCGAGAAGGCC 37910
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||||||| || | |||||| |||| ||||| | ||||| || |||
Sbjct 37909 ATCGAGACATACAACTACATGTCCAACAAATACTTCACACACGCGTCTCCAACGCTTTTC 37850
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
||||| || ||||| | || || |||||| || ||||| || | | |||||| ||
Sbjct 37849 AACGCCGGAACACCCAACCCACAGATGTCCTCCTGCTTCCTCATCGATATCAAGGATGAC 37790
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAA--ATCTCAAAGTGGGCTG 111849
||| | ||||| |||| ||| || | | |||| | | ||||| ||| ||||
Sbjct 37789 AGCATCGAAGGCATCTACGACACGCTGAAG--ACGTGCGCTATGATCTCCAAGACCGCTG 37732
Query 111850 GTGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTAC 111907
| ||||| || | | | ||| || | |||| | | ||| || | | || ||
Sbjct 37731 GCGGTATTGGTCTCAATGTTCATCGCATCCGTGCCACC--GGCTCATACATCGGTGGAAC 37674
Query 111908 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 111967
|| || || | || | || || |||||||| || | |||| ||| || || ||
Sbjct 37673 GAACGGAACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACAACACCGCTCGTTA 37614
Query 111968 TGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024
||| |||| | ||| | ||| || || |||| |||| || |||||||||||
Sbjct 37613 TGTCGACCAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTCGAGCCATGGCA 37554
Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084
||| ||| || | | |||||||| | || ||||| || | || ||| ||
Sbjct 37553 CGCCGATGTCTTTGGCTTCCTTGATCTTCGCAAGAACCATGGCAAGGAAGAGATCCGCGC 37494
Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144
||| ||| | |||| |||||| |||||||| || |||||||||||| | || |||| |
Sbjct 37493 CCGTGATTTGTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGGGTCCAGGATAA 37434
Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGGTGA 112204
||| | ||| |||| || || || || | || || || | |||| | | || ||
Sbjct 37433 TGGAGAGTGGACTCTTTTCTGCCCGAACGAAGCCCCTGGGTTGGCCGACGTCTATGGCGA 37374
Query 112205 GGAGTTTGAAGCCCTCTA-CACAAAGTACGAGGAAGAAAGTCGGGCGAC-TGCGACGGTG 112262
||||| || | || || ||| ||||| |||| || | || | ||| | ||| |||
Sbjct 37373 CGAGTTCGAGGAGCTGTATCAC-AAGTATGAGGCCGAGGGACGCG-GACGAGAGACTGTG 37316
Query 112263 CCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 112321
| || | || | | ||| | || || ||| || | || ||||||||||| | || ||
Sbjct 37315 CGCGC-CCAGAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGACTGGAAACCCGTA 37257
Query 112322 TATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 112381
|||||| ||||| || || || |||| || || || || ||||| | || ||
Sbjct 37256 TATGCTCTACAAGGATGCATGCAACCGCAAAAGCAACCAGAAGAACCTCGGAACTATTCG 37197
Query 112382 GAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 112441
|| || |||||||| || || ||| | || | || | |||||| || || ||
Sbjct 37196 CAGCTCTAACCTCTGCACCGAGATCATTGAGTACACCGCACCCGATGAGGTTGCCGTCTG 37137
Query 112442 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACA-TTTGATT 112500
||| | || || | || ||||| ||||||||| | | || | | | |||||
Sbjct 37136 CAACTTGGCCTCGCTTGCACTCCCTGCGTATGTGGA-CATGCAACGTGGCGAGTATGATT 37078
Query 112501 ATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATA 112560
| || ||||||||||| | ||||| || || |||| |||| ||
Sbjct 37077 TCCAGAAGCTCCACGAAGTCGTCCAGGTCGTCACTCGTAATCTGAACAAGATTATCGAGG 37018
Query 112561 GAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 112620
||| ||||| ||| ||||| || || | |||||| | || | ||||
Sbjct 37017 TCAATCACTACCCGGTTCCTGAAGCTCGCAACAGCAACTTCAGACACAGGCCTGTCGGTC 36958
Query 112621 TCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATTCCGAC 112679
| || ||||| ||||| ||||||| ||| | | || |||| | || || || |
Sbjct 36957 TTGGAGTCCAGGGTCTTGCGGATGCCTTCCTCGCCCTG-CGCCTGCCCTTCGACTCTCCC 36899
Query 112680 GAAGCGAAGGAA-ATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGC 112738
||||| |||||| |||| | | || |||||||| || || ||||| ||||| |
Sbjct 36898 GAAGC-AAGGAAGCTCAACACCCAGATCTTTGAGACCATCTACCACGCTGCTCTCACATC 36840
Query 112739 GAGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 112798
| || || |||| ||| ||||||||||||||| | ||||| ||||| | ||
Sbjct 36839 GTCTTGCGATCTGGCCAAGGAACTTGGTCCATATGAAACTTACGAGGGCTCTCCTGTCTC 36780
Query 112799 ACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGA-GACCAAGCTTCACTACGACTGGG 112857
|| || | ||||||| |||||||| |||| | | | ||| | || |||||||
Sbjct 36779 GCAGGGCATACTTCAATATGATATGT-GGAATATCACGCCCACCGACCTCTGGGACTGGG 36721
Query 112858 ACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 112917
| |||||||||| | ||| || | ||| |||| ||| || | | || || |
Sbjct 36720 ATGCTCTCAAGGCAAAGATCGCACAGCATGGTGTTCGCAACTCGCTGCTTGTTGCCCCCA 36661
Query 112918 TGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGAACCCTACACG 112976
|||| || |||||||| | |||| |||||| | | ||||||||||| ||||| || ||
Sbjct 36660 TGCCTACTGCCTCCACATCCCAAATTCTTGGCT-ACAATGAATGCTTCGAACCATATACC 36602
Query 112977 ACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTC 113036
| |||||||| | | | || || ||||| | | |||||| |||
Sbjct 36601 TCCAACATCTACTCCCGCCGTGTTTTGGCCGGCGAGTTCCAGGTCGTCAACCCCTGGCTC 36542
Query 113037 GTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAA 113096
|| | || | || || || || ||||| | | |||||| | | ||| |
Sbjct 36541 CTGAAGGATTTGGTTGACATGGGCCTGTGGTCTGACAACATGAAGAACCGCATCATCGCC 36482
Query 113097 GCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAATTAAGAAGTTGTACCGC 113156
| ||||||||||| || | ||| | ||||| |||||||| ||| | | |||
Sbjct 36481 GATGGTGGTTCCATCCAGAGGATTCCTAACATTCCCGATGAAATCAAGGCGCTATACAAG 36422
Query 113157 ACAGTTTGGGAAAT---CAAGATGAAGGATGTCATTGACATGGCCGCAGATCGTGGTCGC 113213
|| || |||||||| | || | | | ||||| | |||||||| || ||||| |
Sbjct 36421 ACCGTGTGGGAAATCTCCCAG-CGTACCA--TCATTCAGATGGCCGCTGACCGTGGCGCC 36365
Query 113214 TTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGC 113271
||||| |||| |||| ||| | || | |||| | || || ||| ||||
Sbjct 36364 TTCATCGATC--AGTCCCAGTCGCTCAACATTCACATGAAGGAGCCTACCATGGGCAAGA 36307
Query 113272 TCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGGGATGTATTACCTCC 113331
| | || |||||| | | | |||||| |||||||| || || | || |||||||
Sbjct 36306 TTACATCGATGCACTTCGCCGGATGGAAGCTTGGTCTCAAGACCGGCCTCTACTACCTCC 36247
Query 113332 GATCTAAGGC 113341
|| | | |||
Sbjct 36246 GAACAATGGC 36237
>seq46
Length=404262
Score = 105 bits (116), Expect = 8e-18
Identities = 150/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTT-TGATACAAAGTCGC 102168
|||||| ||||| | || || || |||||| | |||| | | | ||||| | |
Sbjct 337569 AGTTCCCTGTATCCGCCGCAAGGCCGACTGGGCTCTCCGGTGGATCTCAGACAAAAACTC 337628
Query 102169 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 102228
| ||||||| | || ||| | || || || || || || ||||||||||| ||||
Sbjct 337629 GA-CCTTTGCGAACCGCCTCGTTGCCTTCGCCGCCGTAGAAGGCATCTTCTTCTCCGGTT 337687
Query 102229 CCTTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCC 102287
||||| ||| | || | ||| | |||||||| || |||||||| || ||| |||||||
Sbjct 337688 CCTTC-GCGTCCATCTTCTGGTTGAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCC 337746
Query 102288 AACGAGCTTATCTCTCGTGACGAGGG 102313
||||| || || ||||||||||||||
Sbjct 337747 AACGAACTCATATCTCGTGACGAGGG 337772
>seq390
Length=251960
Score = 100 bits (110), Expect = 4e-16
Identities = 244/366 (67%), Gaps = 4/366 (1%)
Strand=Plus/Plus
Query 176689 CTTGAGAAGACTTGGCCAGAAGTAGTGAATCATATTGAGAATGAGACCCTTGATGTGGGA 176748
|||||| ||||| || | | | |||| | ||||| | |||||||||||| ||
Sbjct 45756 CTTGAGCAGACTAGGGAACTGGCATTGAAGGAAATTGATCAGGAGACCCTTGATATGACT 45815
Query 176749 ACCGTCGTTATCGGCATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATC 176808
||||||| || ||||||||||||||||||| | ||||| ||||| || ||
Sbjct 45816 GCCGTCGTGGTCCTGATCCGTCATGATCATGAGATGTCCATAGCGAAGGCCGCGCGTGTC 45875
Query 176809 TTGATAGTCCTTACCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTT 176868
||| ||||| ||||||||||| | || ||| |||| | | || || |||||
Sbjct 45876 CGTATATTCCTTCTTGTGTTGAAGACCAAGGAACTTTTTGATGTTCTGGATTTCCTGGTT 45935
Query 176869 TGATGTGAGCTGTGTGACAGAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAA 176928
| | ||| || ||| ||||| || ||||| ||| ||||| || || ||
Sbjct 45936 CTTCGATATCTGATCGATAGATGCATCTCGGACATTGAGTAGCTTACCACGCAGGGGAAA 45995
Query 176929 GACACCGTAGTGATCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGA 176988
||||||| | |||| || | || || | | || || | |||||| | || ||
Sbjct 45996 GACACCGAAAAGATCTGGATCCACGACCGCACGGCCAGCCAAAGCGAGCAGACTGGCCGA 46055
Query 176989 ATCACCCTCTGTCACGATGAGTGTACACTTGCCAG--ATTGTGCCGTACCCGCCTTGTTC 177046
|| || || || | || || || ||||| |||| || | ||||| |||||||||
Sbjct 46056 GTCTCCTTCGGTGAGAATTAGAGTGCACTT-CCAGCCATCCT-TGGTACCAGCCTTGTTC 46113
Query 177047 GCATCA 177052
||||||
Sbjct 46114 GCATCA 46119
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620736495187920
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