Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq634 179 4e-40
seq23 102 1e-16
>seq634
Length=211807
Score = 179 bits (198), Expect = 4e-40
Identities = 565/865 (65%), Gaps = 19/865 (2%)
Strand=Plus/Plus
Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340
||||| |||| || || | ||||| || | | ||| || ||||||| || |
Sbjct 37113 GGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATG 37172
Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400
|| || || || | ||| || || ||| || | ||||||||| || |||| |
Sbjct 37173 ATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTTGCTTTTGCGG 37232
Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460
|||||||||||||| |||||||| || ||| | ||||| || ||||| | || ||| |||
Sbjct 37233 TTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATG 37292
Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519
|| | ||| | | || | |||| | ||||| | || | || || |||| |||||
Sbjct 37293 GCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCTCGTCCGCGTCCCTCGGCCTCATACTT 37351
Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGG 110578
| |||| ||||| || || | || || || || | | |||| | ||| || |
Sbjct 37352 GTGATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCA-ACCCAGGGGCTTCGTTCG 37410
Query 110579 GACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCC 110638
| ||||| || | ||| | |||| |||| |||| ||||||||| |||||||||||||
Sbjct 37411 GGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCC 37470
Query 110639 ACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCT 110698
||| || |||| | |||||| || |||||| | || ||||| ||| || |
Sbjct 37471 ACAGAGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGAT 37530
Query 110699 CCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC----- 110753
| | ||| | | || ||| | ||||||||| ||||| |||| |||| | ||
Sbjct 37531 CAAGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGC 37590
Query 110754 -CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAG 110812
|||| | || |||||| ||||| || || ||| || |||| | |||||||
Sbjct 37591 GCTTATTGCCAC---CCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAG 37647
Query 110813 GAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGT 110872
| || | || | ||| || || || || | || || ||||||| |||
Sbjct 37648 GGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGC 37707
Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGT 110931
|| | || | ||||||||| || || ||| || || ||| ||| | ||
Sbjct 37708 GATGAACATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCT-TCAGC 37766
Query 110932 GTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATC 110991
|| | || || || || || || ||||| | | || || ||||| || ||||||
Sbjct 37767 GTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATC 37826
Query 110992 TGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG- 111050
|| || || ||||| || ||||| || || || | ||| || ||| || |||
Sbjct 37827 TGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGA--AGTATTTGT 37884
Query 111051 -GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGG 111109
|||||| | ||||||||| |||| || | |||| ||||| || |||| ||
Sbjct 37885 TGGACATGTAGTTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGG 37944
Query 111110 CAACTCGCATGAACATATATTGAGG 111134
| || ||||||| ||| | ||| ||
Sbjct 37945 CTACACGCATGAGCATGTGTTGTGG 37969
>seq23
Length=126716
Score = 102 bits (112), Expect = 1e-16
Identities = 282/422 (67%), Gaps = 33/422 (8%)
Strand=Plus/Plus
Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562
|||||||||||||| || || | || || | || || | ||| || || ||| ||
Sbjct 98477 CGATCGAAACGACCGGGTCGCATGAGCGCCTTGTCGAGGACATCCGGCCGATTCGTACCG 98536
Query 11563 GCAATGACTACAA--TGC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619
|||| || |||| ||| ||||| ||| |||||| ||||| ||||| |||| ||
Sbjct 98537 GCAAGCACAACAACTTGCTCAGTCG---TGTTGAAACCATCCATCTCTGTCAGAATTTGA 98593
Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAA----CGCTT--C 11673
|| | ||| || || || || ||| ||||| ||| || | ||| |
Sbjct 98594 TTCAACGTAGCCTCTCGTTCGTCATTG---------CCACC-GCCAAAGTTGCCCTTTGC 98643
Query 11674 T-TA------CCGACAGCGTCAATCTCATCGATGAATACGATACACGG-TTGGTTGGCAC 11725
| || || | |||||||| ||||||||||| | ||| ||||| || || | |
Sbjct 98644 TCTAGAACGTCCTATGGCGTCAATTTCATCGATGAAGATGATGCACGGCGTGCTTTTC-C 98702
Query 11726 GTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGA 11785
| || | | || | || || || ||| || || ||||| |||||||| || ||||
Sbjct 98703 GGGCATTGGCAAACAAGTCCCGCACTCGCGAAGCACCGACACCGACGAACATTTCGACGA 98762
Query 11786 AGTTTGCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844
| | | || || ||||| ||||||||| ||| |||||||| |||| ||
Sbjct 98763 ACTCAGAACCACTCACGCTGAA-AAAGGGAACACCAGATTCACCAGCTGTGGCCTTTGCC 98821
Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904
|||||||| |||||||| || |||| || | ||||| ||| || || || ||||| ||
Sbjct 98822 AGGAGAGTTTTACCCGTTCCTGGTGGTCCGGAGAGAATGGCTCCTCGAGGAATCTTAGCG 98881
Query 11905 CC 11906
||
Sbjct 98882 CC 98883
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588970397365800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |