Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq634 179 4e-40 seq23 102 1e-16 >seq634 Length=211807 Score = 179 bits (198), Expect = 4e-40 Identities = 565/865 (65%), Gaps = 19/865 (2%) Strand=Plus/Plus Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 ||||| |||| || || | ||||| || | | ||| || ||||||| || | Sbjct 37113 GGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATG 37172 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || || || || | ||| || || ||| || | ||||||||| || |||| | Sbjct 37173 ATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTTGCTTTTGCGG 37232 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 |||||||||||||| |||||||| || ||| | ||||| || ||||| | || ||| ||| Sbjct 37233 TTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATG 37292 Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGTTGCGTTAGCGAGACCTTCCTCCTCGTACTT 110519 || | ||| | | || | |||| | ||||| | || | || || |||| ||||| Sbjct 37293 GCGTACCAGAGCTTCTG-GGCGCGCACAGTCTCTCGTCCGCGTCCCTCGGCCTCATACTT 37351 Query 110520 GGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GTCGG 110578 | |||| ||||| || || | || || || || | | |||| | ||| || | Sbjct 37352 GTGATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCA-ACCCAGGGGCTTCGTTCG 37410 Query 110579 GACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATGAACAGGTCAGGAATCC 110638 | ||||| || | ||| | |||| |||| |||| ||||||||| ||||||||||||| Sbjct 37411 GGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCC 37470 Query 110639 ACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCGTAGCT 110698 ||| || |||| | |||||| || |||||| | || ||||| ||| || | Sbjct 37471 ACAGAGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGAT 37530 Query 110699 CCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC----- 110753 | | ||| | | || ||| | ||||||||| ||||| |||| |||| | || Sbjct 37531 CAAGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGC 37590 Query 110754 -CTTACGACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAG 110812 |||| | || |||||| ||||| || || ||| || |||| | ||||||| Sbjct 37591 GCTTATTGCCAC---CCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAG 37647 Query 110813 GAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACGAATGT 110872 | || | || | ||| || || || || | || || ||||||| ||| Sbjct 37648 GGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGC 37707 Query 110873 CGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTGTGAGT 110931 || | || | ||||||||| || || ||| || || ||| ||| | || Sbjct 37708 GATGAACATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCT-TCAGC 37766 Query 110932 GTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATC 110991 || | || || || || || || ||||| | | || || ||||| || |||||| Sbjct 37767 GTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATC 37826 Query 110992 TGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGACCTTG- 111050 || || || ||||| || ||||| || || || | ||| || ||| || ||| Sbjct 37827 TGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGA--AGTATTTGT 37884 Query 111051 -GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACCGTGAATACCAATGG 111109 |||||| | ||||||||| |||| || | |||| ||||| || |||| || Sbjct 37885 TGGACATGTAGTTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGG 37944 Query 111110 CAACTCGCATGAACATATATTGAGG 111134 | || ||||||| ||| | ||| || Sbjct 37945 CTACACGCATGAGCATGTGTTGTGG 37969 >seq23 Length=126716 Score = 102 bits (112), Expect = 1e-16 Identities = 282/422 (67%), Gaps = 33/422 (8%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 |||||||||||||| || || | || || | || || | ||| || || ||| || Sbjct 98477 CGATCGAAACGACCGGGTCGCATGAGCGCCTTGTCGAGGACATCCGGCCGATTCGTACCG 98536 Query 11563 GCAATGACTACAA--TGC-CAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 |||| || |||| ||| ||||| ||| |||||| ||||| ||||| |||| || Sbjct 98537 GCAAGCACAACAACTTGCTCAGTCG---TGTTGAAACCATCCATCTCTGTCAGAATTTGA 98593 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGAA----CGCTT--C 11673 || | ||| || || || || ||| ||||| ||| || | ||| | Sbjct 98594 TTCAACGTAGCCTCTCGTTCGTCATTG---------CCACC-GCCAAAGTTGCCCTTTGC 98643 Query 11674 T-TA------CCGACAGCGTCAATCTCATCGATGAATACGATACACGG-TTGGTTGGCAC 11725 | || || | |||||||| ||||||||||| | ||| ||||| || || | | Sbjct 98644 TCTAGAACGTCCTATGGCGTCAATTTCATCGATGAAGATGATGCACGGCGTGCTTTTC-C 98702 Query 11726 GTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGA 11785 | || | | || | || || || ||| || || ||||| |||||||| || |||| Sbjct 98703 GGGCATTGGCAAACAAGTCCCGCACTCGCGAAGCACCGACACCGACGAACATTTCGACGA 98762 Query 11786 AGTTTGCGGCA-GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCG 11844 | | | || || ||||| ||||||||| ||| |||||||| |||| || Sbjct 98763 ACTCAGAACCACTCACGCTGAA-AAAGGGAACACCAGATTCACCAGCTGTGGCCTTTGCC 98821 Query 11845 AGGAGAGTCTTACCCGTACCAGGTGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCA 11904 |||||||| |||||||| || |||| || | ||||| ||| || || || ||||| || Sbjct 98822 AGGAGAGTTTTACCCGTTCCTGGTGGTCCGGAGAGAATGGCTCCTCGAGGAATCTTAGCG 98881 Query 11905 CC 11906 || Sbjct 98882 CC 98883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588970397365800