Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq634 262 5e-65
seq46 91.5 2e-13
>seq634
Length=211807
Score = 262 bits (290), Expect = 5e-65
Identities = 912/1395 (65%), Gaps = 35/1395 (3%)
Strand=Plus/Plus
Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGA 105993
|||||||| | || || ||||| ||||||||||| | | |||||| |||| | |||||
Sbjct 36591 TAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGT-AGCCAAGAATTTGGGATGTGGA 36649
Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTC 106053
||| || ||||| || || | | || ||| |||| ||| | | ||| | |
Sbjct 36650 GGCAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACCATGCTGTGCGATCTTTGC 36709
Query 106054 CTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112
||||||| |||||||||| || | | | || | | |||| |||||||| ||||||
Sbjct 36710 CTTGAGAGCATCCCAGTCCCAGAGGTCGGTGGGCGTGATATTCC-ACATATCATATTGAA 36768
Query 106113 GCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCA 106172
| | || || || ||||| ||||| | || ||||| | ||| | | | ||||
Sbjct 36769 GTATGCCCTGCGAGACAGGAGAGCCCTCGTAAGTTTCATATGGACCAAGTTCCTTGGCCA 36828
Query 106173 ATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCT 106232
|| || || || | ||||| || ||||| |||||||| | | || | ||
Sbjct 36829 GATCGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCT 36888
Query 106233 CCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCT 106291
| | ||||| || || || | | || ||| | || ||||||| |||||
Sbjct 36889 TCCTTGCTTCGGGAGAGTCGAAGG-GCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCC 36947
Query 106292 TGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---ACG 106348
|| || || | ||| | ||| ||||||| | || || | ||| || ||| ||
Sbjct 36948 TGGACTCCAAGACCGACAGGCCTGTGTCTGAAGTTG--CTGTTGCG-AGCTTCAGGAACC 37004
Query 106349 GGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCA 106408
|| || ||| || || | ||| ||||| || || | || || |||
Sbjct 37005 GGGTAGTGATTGACCTCGATAATCTTGTTCAGATTACGAGTGACGACCTGGACGACTTCG 37064
Query 106409 TGAAGTTTTTCATAATCAAAAGTGCGA-GTCTCTTCATTGACATACTTTGGAAGGGCGAT 106467
|| || || | ||||| | || | || | | | |||||| || || || |
Sbjct 37065 TGGAGCTTCTGGAAATCATACTCGCCACGTTGCATG-TCCACATACGCAGGGAGTGCAAG 37123
Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527
|| ||||| ||||| || || |||||| | |||||||| | || || || ||
Sbjct 37124 CGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCA 37183
Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587
| ||| || || ||| || || | ||||| ||||| || || |||||| |||||
Sbjct 37184 GAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCATC 37243
Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA- 106646
|||||||||||| || || | || ||||| ||||| | || ||| || || | ||| |
Sbjct 37244 CTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAG 37303
Query 106647 CATCGGCGGCTGGTACAATGGCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTG-TAGAG 106704
| || | ||| | ||| | | | | || |||||||| ||||| ||| ||||| || ||
Sbjct 37304 CTTCTG-GGCGCGCACAGTCTC-TCGTCCGCGTCCCTCGGCCTCATAC-TTGTGATACAG 37360
Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764
| || ||||| || || |||||| | || || || | || || ||||||||
Sbjct 37361 CTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAG 37420
Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824
|| ||| | ||| |||| |||||||||||||| ||||| ||||||||||| | |
Sbjct 37421 AGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTA 37480
Query 106825 AAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTC 106884
|| | ||| | || |||||| | || ||||| || | |||||||| |
Sbjct 37481 GAACAAATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCC 37540
Query 106885 CATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC----- 106939
| || ||| |||||||||||||| || |||| |||| || || | | |||
Sbjct 37541 AAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACC---TGGGCGCTTATT 37597
Query 106940 -CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACC 106998
||| | || | ||||| || || ||| |||| | || |||||||| || || | ||
Sbjct 37598 GCCACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCC 37657
Query 106999 ATCTGATTGACCATTTG-TCCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGATG 107056
| || || || | ||| |||| || ||| |||| | | ||| |
Sbjct 37658 GTTGGACGTTCCGTTCGTTCCACCGATGTATGAG--CCGGTGGCACGGATGCGATGAACA 37715
Query 107057 TGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAG 107116
| | |||||||| ||||| ||| ||||| || ||| | | || || | |||
Sbjct 37716 TTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAG 37775
Query 107117 ATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTT 107176
|| || | ||| ||| |||||| | |||| |||||||| ||||||||| || |
Sbjct 37776 ATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTG 37835
Query 107177 GGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTT 107235
||||| || || ||||| || ||||| | ||||| |||| || | | |||||| |
Sbjct 37836 GGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAA-GTATTTGTTGGACATGTA 37894
Query 107236 GTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCAT 107295
|| ||||||||| | | | || |||||||| ||||||||||| | ||| ||||||||
Sbjct 37895 GTTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCAT 37954
Query 107296 AAACATGTATTGGGG 107310
| ||||| ||| ||
Sbjct 37955 GAGCATGTGTTGTGG 37969
>seq46
Length=404262
Score = 91.5 bits (100), Expect = 2e-13
Identities = 310/473 (66%), Gaps = 25/473 (5%)
Strand=Plus/Minus
Query 116986 TAGTCCCCAACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 117045
|| || || || | |||||| |||||||| ||||| || | || ||||| |||||
Sbjct 338078 TAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTCCATG 338019
Query 117046 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACC--CCAACTTGTTTGAG 117098
||||| || || || | ||||| | | ||| || | |||| |||
Sbjct 338018 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGAGAGCCAA-------GAG 337966
Query 117099 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 117158
|| || || | || |||| ||||||| | |||| || |||||||| |||| ||
Sbjct 337965 CAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAG 337906
Query 117159 ATTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 117218
| ||| || || || || || |||| ||| ||| || || || || | | |||
Sbjct 337905 AGCACACGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGAT 337846
Query 117219 GGCGTGGA--TAGTTTCGGTAGTGG-GTCTATTACGCAAAGTCTTGAAGAGCTC-CACGG 117274
||| | || | ||| | | | || | || | | || |||||| ||||
Sbjct 337845 GGCCTCGACTTCCTTTTGCGACGGACGTGTGTTGAGGAGAGA---GAAGAGTAGGCACG- 337790
Query 117275 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTG 117334
| || || ||| | ||||| || || || || ||||| || |||||| ||||| |
Sbjct 337789 CGAAGTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGG 337730
Query 117335 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 117393
||||||| || |||||||||||||| | || | ||| ||| || ||||||||||||||
Sbjct 337729 GCATGAGGCCGCGCTTCTTCAACCAGAAGATGGACGC-GAAGGAACCGGAGAAGAAGATG 337671
Query 117394 CCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT 117446
|| || || || || |||| ||||| | || |||| |||| |||||
Sbjct 337670 CCTTCTACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGG-TCGAGTTTTTGT 337619
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589975187807640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |