Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq412 143 6e-29
seq738 109 1e-18
seq11 107 4e-18
>seq412
Length=249799
Score = 143 bits (158), Expect = 6e-29
Identities = 160/214 (75%), Gaps = 0/214 (0%)
Strand=Plus/Plus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
|| ||| | ||| || ||||||||||| || || ||||| |||| || || | |||||
Sbjct 4314 CAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 4373
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
||| |||||||| || |||||||| || || || || || || |||||||| || || ||
Sbjct 4374 TTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATC 4433
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
||||||||| |||||||| || ||||| || || ||||| || ||||| | ||
Sbjct 4434 CTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATAGT 4493
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||| || |||| || || ||||| | ||||||
Sbjct 4494 CTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 4527
Score = 123 bits (136), Expect = 6e-23
Identities = 141/188 (75%), Gaps = 6/188 (3%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || || |||||||| || ||||| ||||| |||| || || | ||||| |||
Sbjct 4546 ACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCCTCG 4605
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | ||| ||||||||||| || ||||| || || || ||
Sbjct 4606 AGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGG 4665
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTC 195108
|| || |||||||| || ||||| || ||| ||| || |||||||||| |||
Sbjct 4666 ATCTTCGATTTGACGTTGTCGATGGTATCGCTCGA---TTCGACCTCAAGGGTAATGGTC 4722
Query 195109 TTTCCTGT 195116
|| || ||
Sbjct 4723 TTACCGGT 4730
Score = 122 bits (134), Expect = 2e-22
Identities = 138/185 (75%), Gaps = 0/185 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| ||||| || || || ||||| |||| ||||| | ||||| |||
Sbjct 4829 ACGAGATGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCG 4888
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| |||||||| || | || |||||||| || || |||||||| || || ||
Sbjct 4889 AGCTGCTTGCCTGCGAAAATCAAGCGCTGTTGGTCAGGCGGGATGCCTTCCTTATCCTGG 4948
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || ||||| |||||||| ||||| || | ||| | |||||
Sbjct 4949 ATCTTCGACTTGACATTGTCAATCGTGTCCGAGGACTCCACCTCCAAGGTGATGGTCTTG 5008
Query 195112 CCTGT 195116
|| ||
Sbjct 5009 CCGGT 5013
>seq738
Length=174967
Score = 109 bits (120), Expect = 1e-18
Identities = 105/135 (78%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| ||||| || || || ||||| |||| ||| || | ||||| ||||||||
Sbjct 25252 GTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTG 25311
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || |||||||| | || |||||||| || |||||||| || ||||| ||||| ||
Sbjct 25312 CTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTT 25371
Query 195057 TTGCTTGACGTTCTC 195071
|||||| || ||
Sbjct 25372 GGACTTGACATTGTC 25386
>seq11
Length=137347
Score = 107 bits (118), Expect = 4e-18
Identities = 94/117 (80%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || ||||| || || || ||||| |||| || || | || ||||||
Sbjct 124732 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCG 124791
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048
|||||||| || |||||||| || || ||||||||||| |||||||| || ||||||
Sbjct 124792 AGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCT 124848
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109470782207687
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |