Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq412 100 2e-16
>seq412
Length=249799
Score = 100 bits (110), Expect = 2e-16
Identities = 154/218 (71%), Gaps = 10/218 (5%)
Strand=Plus/Plus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
|| ||||||||| | ||| |||||||| ||||| ||||| || ||| | || ||||
Sbjct 4314 CAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 4373
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| ||||| || ||||| || || || || ||||| || | || | |||||||| ||
Sbjct 4374 TTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATC 4433
Query 34889 GCTAATCTTCTGTTTGACG-----GATGCTATCGATTCACCGGCCTCAACATCGACGGTT 34943
||| || ||||||| |||| ||||| || | ||| || |||| |||
Sbjct 4434 CTGAATTTTTGATTTGACGTTGTCGATGGTATCGG---AC--GACTCCACCTCGAGGGTG 4488
Query 34944 ATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || || || || || ||||| || |||||||||||
Sbjct 4489 ATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Score = 82.4 bits (90), Expect = 5e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832
|||||||| | || || ||||| ||||| |||||||| || |||| | || |||
Sbjct 4090 ACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGGCCGTCCTCC 4149
Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892
| ||| || || ||||| || || ||||||||||| | || | ||||| || ||
Sbjct 4150 AACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGAATACCCTCTTTATCCTGG 4209
Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952
||||| || ||| | || | || | |||||| || | || || || ||
Sbjct 4210 ATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACCTCTAGCGTGATCGTCTTG 4269
Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982
|| ||||| ||||| || ||||||||||||
Sbjct 4270 CCGGTGAGTGTCTTGACGAAGATCTGCATA 4299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324630589124808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |