Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq634 284 2e-71 seq46 174 3e-38 >seq634 Length=211807 Score = 284 bits (314), Expect = 2e-71 Identities = 1004/1553 (65%), Gaps = 49/1553 (3%) Strand=Plus/Plus Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755 ||| || ||||| ||| || ||||| | | | | |||||||||||| | ||||| Sbjct 36338 GTTGAGCGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATGATGGT 36397 Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815 | |||||||| ||||||||||||||| | | | |||| || || || | | || Sbjct 36398 ACGCTGGGAGATTTCCCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATGTTAGG 36457 Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG------CATGTCCTCGTT 212869 || |||| | || || | || | | | || | ||| ||||| || Sbjct 36458 AATCCTCTGGATGGAACCACC----ATCGGC-GATG-ATGCGGTTCTTCATGTTGTCAGA 36511 Query 212870 CCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACC 212929 ||| |||||| || ||| ||| | || |||||||| | |||||| || || Sbjct 36512 CCACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCC 36571 Query 212930 TGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCC 212989 | | || | | ||| | ||| || || || || |||| || || |||| || Sbjct 36572 GGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGTAGCC 36631 Query 212990 CAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCC 213049 ||||| || | ||| ||| || |||||||| || || || || ||| | || || Sbjct 36632 AAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACC 36691 Query 213050 GTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTC 213109 |||| |||| | || | |||||||||| ||||| | Sbjct 36692 ATGCTGTGCGATCTTTGCCTTGAGAGCATCCCAGTCCCAG---------AGGTCGGTGGG 36742 Query 213110 CTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGA 213169 | | | |||||||| ||| | || | ||||| | || || ||||| ||||| Sbjct 36743 CGTGATATTCCACATATCATATTGAAGTATGCCCTGCGAGACAGGAGAGCCCTCGTAAGT 36802 Query 213170 GGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGAT 213229 || || ||| | ||||||||||| ||||| |||| || ||||||| |||||| Sbjct 36803 TTCATATGGACCAAGTTCCTTGGCCAGATCGCAAGACGATGTGAGAGCAGCGTGGTAGAT 36862 Query 213230 GGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCAT 213289 ||| ||||| |||| ||||||||||| | || || || || |||||||| || Sbjct 36863 GGTCTCAAAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCGAAGGGCAGGCGCAG 36922 Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 | |||| |||| || || |||||||| || | |||| || |||||||| | ||| Sbjct 36923 GGCGAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCTGTGTCTGAAGTT 36982 Query 213350 AGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGC 213408 ||| |||| || | ||||| ||| ||||| |||||||| || || | Sbjct 36983 GCTGTTGCGAGCT-TCAGGAACCGGGTAGTGATTGACCTCGATAATCTTGTTCAGATTAC 37041 Query 213409 GGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT--C 213466 | ||| | || | | ||| | | || | || | || || || || ||| | Sbjct 37042 GAGTGACGACCTGGACGACTTCGTGGAGCTTCTGGAAATCATACTCG----CCACGTTGC 37097 Query 213467 CTG--CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAG 213524 || |||| || |||| || || | ||||| |||||| ||||| ||||| | | Sbjct 37098 ATGTCCACATACGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGT 37157 Query 213525 TCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGG 213584 | |||||||| |||||||||||||| ||||| || || || || || ||||||| Sbjct 37158 GCGGTGTACTCAATGATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTC 37217 Query 213585 TGGTTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643 ||||| | |||||| | ||| | ||||||||||||||| || ||| || ||||| Sbjct 37218 TGGTT-GCTTTTGCGGTTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGT 37276 Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703 ||||| | | || || | |||||| | | ||| | | || | | | | || | Sbjct 37277 CTGGGCCTCGAGGATGGCGTACCAGAGCTTC-TGGGCGCGCACAGTCTCTCGTCCGCGTC 37335 Query 213704 GGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAG 213763 || ||||| |||| | || ||||| | ||| |||| ||| |||| | ||| Sbjct 37336 CCTCG--GCCTCATACTTGTGATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAA 37393 Query 213764 TCCCGGACAGGATGCG---GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTG 213820 || || || | || || || | || |||| || || | ||| ||| | || Sbjct 37394 CCCAGG---GGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTT 37450 Query 213821 CATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCAC 213880 |||||| ||||| || | |||||| ||| ||||| || | || | |||| ||| Sbjct 37451 CATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTT 37510 Query 213881 TCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTA 213940 ||| ||| ||||| ||||| || ||| |||||| || |||||||| ||||| | ||| Sbjct 37511 GCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTA 37570 Query 213941 GATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCATGTT 213997 |||||| || || || || | ||| ||| |||||||| || | || |||| Sbjct 37571 GATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTGGTCGACATAACGAGCGGTGTTGTT 37630 Query 213998 GAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGA 214057 ||| || || | || | || ||||||||| |||||| ||||| | || || || Sbjct 37631 ATAGACACGAAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGA 37690 Query 214058 GCCGGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115 ||||| ||| | | | || ||| |||| || || || || ||| |||||||||| Sbjct 37691 GCCGGTGGCACGGATGCGATGAACATTGAGA--CCAATACCGCCAGCGGTCTTGGAGATC 37748 Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175 || ||||| | ||| || || |||||| | ||||||||||| ||| | | Sbjct 37749 ATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATATCGATG 37808 Query 214176 AAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGG 214228 | ||||||| || | ||| || ||| | || | |||||||||||| || Sbjct 37809 AGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGG 37861 >seq46 Length=404262 Score = 174 bits (192), Expect = 3e-38 Identities = 344/505 (68%), Gaps = 17/505 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| || || || || ||||| |||||||||||||| || ||| |||||||||||| Sbjct 338082 CTGGTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTC 338023 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA---G 47955 ||||||| ||||||||||| | ||| || | | | ||| | | ||| | Sbjct 338022 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGA---GAGCCAAGAG 337966 Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015 |||| | || |||||| |||||||||| | ||||||| || ||||||||| | || Sbjct 337965 CAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAG 337906 Query 48016 GG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074 | |||||| | ||| | |||||| ||||| | ||| || || ||||| | | Sbjct 337905 AGCACACGGT-AGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGA 337847 Query 48075 TCTGCTTAACGCGGGACTCTGAGGG---TTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131 | || || | || || | ||||| | || | |||| | || Sbjct 337846 TGGCCTCGACTTCCTTTTGCGACGGACGTGTGTTGAGGAGA------GAGAAGAGTAGGC 337793 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 | || ||||| |||||| ||| ||||| || ||||| ||||||||||| ||| | Sbjct 337792 ACGCGAAGTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGC 337733 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | ||||||| || | || || | |||||| || | |||||| || || |||||||||| Sbjct 337732 CGGGCATGAGGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGA 337673 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 |||| || || || ||||| || ||| | | | || | | ||| |||||||||| Sbjct 337672 TGCCTTCTACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGGTCGAGTTTTTGTCTGAGA 337613 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTT 48336 |||| || |||||||| ||||| Sbjct 337612 TCCACCGGAGAGCCCAGTCGGCCTT 337588 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931523938794240