Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq634 284 2e-71
seq46 174 3e-38
>seq634
Length=211807
Score = 284 bits (314), Expect = 2e-71
Identities = 1004/1553 (65%), Gaps = 49/1553 (3%)
Strand=Plus/Plus
Query 212696 GTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCGGCCATGTCTATGATATC 212755
||| || ||||| ||| || ||||| | | | | |||||||||||| | |||||
Sbjct 36338 GTTGAGCGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATGATGGT 36397
Query 212756 TCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCCGGG 212815
| |||||||| ||||||||||||||| | | | |||| || || || | | ||
Sbjct 36398 ACGCTGGGAGATTTCCCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATGTTAGG 36457
Query 212816 GATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCG------CATGTCCTCGTT 212869
|| |||| | || || | || | | | || | ||| ||||| ||
Sbjct 36458 AATCCTCTGGATGGAACCACC----ATCGGC-GATG-ATGCGGTTCTTCATGTTGTCAGA 36511
Query 212870 CCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACC 212929
||| |||||| || ||| ||| | || |||||||| | |||||| || ||
Sbjct 36512 CCACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCC 36571
Query 212930 TGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCC 212989
| | || | | ||| | ||| || || || || |||| || || |||| ||
Sbjct 36572 GGCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGTAGCC 36631
Query 212990 CAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCACTCC 213049
||||| || | ||| ||| || |||||||| || || || || ||| | || ||
Sbjct 36632 AAGAATTTGGGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACC 36691
Query 213050 GTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTC 213109
|||| |||| | || | |||||||||| ||||| |
Sbjct 36692 ATGCTGTGCGATCTTTGCCTTGAGAGCATCCCAGTCCCAG---------AGGTCGGTGGG 36742
Query 213110 CTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTAAGA 213169
| | | |||||||| ||| | || | ||||| | || || ||||| |||||
Sbjct 36743 CGTGATATTCCACATATCATATTGAAGTATGCCCTGCGAGACAGGAGAGCCCTCGTAAGT 36802
Query 213170 GGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTAGAT 213229
|| || ||| | ||||||||||| ||||| |||| || ||||||| ||||||
Sbjct 36803 TTCATATGGACCAAGTTCCTTGGCCAGATCGCAAGACGATGTGAGAGCAGCGTGGTAGAT 36862
Query 213230 GGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCATCAT 213289
||| ||||| |||| ||||||||||| | || || || || |||||||| ||
Sbjct 36863 GGTCTCAAAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCGAAGGGCAGGCGCAG 36922
Query 213290 GCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349
| |||| |||| || || |||||||| || | |||| || |||||||| | |||
Sbjct 36923 GGCGAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCTGTGTCTGAAGTT 36982
Query 213350 AGACTTG-GAGCACTCCTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGC 213408
||| |||| || | ||||| ||| ||||| |||||||| || || |
Sbjct 36983 GCTGTTGCGAGCT-TCAGGAACCGGGTAGTGATTGACCTCGATAATCTTGTTCAGATTAC 37041
Query 213409 GGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACGTAGCCCCCGT--C 213466
| ||| | || | | ||| | | || | || | || || || || ||| |
Sbjct 37042 GAGTGACGACCTGGACGACTTCGTGGAGCTTCTGGAAATCATACTCG----CCACGTTGC 37097
Query 213467 CTG--CACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAG 213524
|| |||| || |||| || || | ||||| |||||| ||||| ||||| | |
Sbjct 37098 ATGTCCACATACGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGT 37157
Query 213525 TCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGG 213584
| |||||||| |||||||||||||| ||||| || || || || || |||||||
Sbjct 37158 GCGGTGTACTCAATGATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTC 37217
Query 213585 TGGTTTGACTTTGCGTTGGCA-GAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAG 213643
||||| | |||||| | ||| | ||||||||||||||| || ||| || |||||
Sbjct 37218 TGGTT-GCTTTTGCGGTTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGT 37276
Query 213644 CTGGGACACCAGTATCTGGCTCCAGAGGTACCTGGCCTTGACCACCCGCCTGACAGCTCC 213703
||||| | | || || | |||||| | | ||| | | || | | | | || |
Sbjct 37277 CTGGGCCTCGAGGATGGCGTACCAGAGCTTC-TGGGCGCGCACAGTCTCTCGTCCGCGTC 37335
Query 213704 GGGCGTAGCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAG 213763
|| ||||| |||| | || ||||| | ||| |||| ||| |||| | |||
Sbjct 37336 CCTCG--GCCTCATACTTGTGATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAA 37393
Query 213764 TCCCGGACAGGATGCG---GGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTG 213820
|| || || | || || || | || |||| || || | ||| ||| | ||
Sbjct 37394 CCCAGG---GGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTT 37450
Query 213821 CATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCAC 213880
|||||| ||||| || | |||||| ||| ||||| || | || | |||| |||
Sbjct 37451 CATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTT 37510
Query 213881 TCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTA 213940
||| ||| ||||| ||||| || ||| |||||| || |||||||| ||||| | |||
Sbjct 37511 GCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTA 37570
Query 213941 GATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGCCACCATGTT 213997
|||||| || || || || | ||| ||| |||||||| || | || ||||
Sbjct 37571 GATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTGGTCGACATAACGAGCGGTGTTGTT 37630
Query 213998 GAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGA 214057
||| || || | || | || ||||||||| |||||| ||||| | || || ||
Sbjct 37631 ATAGACACGAAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGA 37690
Query 214058 GCCGGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACCGGCGTACTTGGAGATC 214115
||||| ||| | | | || ||| |||| || || || || ||| ||||||||||
Sbjct 37691 GCCGGTGGCACGGATGCGATGAACATTGAGA--CCAATACCGCCAGCGGTCTTGGAGATC 37748
Query 214116 ATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGC 214175
|| ||||| | ||| || || |||||| | ||||||||||| ||| | |
Sbjct 37749 ATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATATCGATG 37808
Query 214176 AAGAAGCAGCTCGAGAGCTGGGGCCTGGACGAGCCAGAGTTGAAAAGCGTGGG 214228
| ||||||| || | ||| || ||| | || | |||||||||||| ||
Sbjct 37809 AGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGG 37861
>seq46
Length=404262
Score = 174 bits (192), Expect = 3e-38
Identities = 344/505 (68%), Gaps = 17/505 (3%)
Strand=Plus/Minus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || || || || ||||| |||||||||||||| || ||| ||||||||||||
Sbjct 338082 CTGGTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTC 338023
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCA---G 47955
||||||| ||||||||||| | ||| || | | | ||| | | ||| |
Sbjct 338022 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGA---GAGCCAAGAG 337966
Query 47956 CAGGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAG 48015
|||| | || |||||| |||||||||| | ||||||| || ||||||||| | ||
Sbjct 337965 CAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAG 337906
Query 48016 GG-ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAA 48074
| |||||| | ||| | |||||| ||||| | ||| || || ||||| | |
Sbjct 337905 AGCACACGGT-AGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGA 337847
Query 48075 TCTGCTTAACGCGGGACTCTGAGGG---TTTGTTGCGCAGGTGCTTGGCATAGAGCATGC 48131
| || || | || || | ||||| | || | |||| | ||
Sbjct 337846 TGGCCTCGACTTCCTTTTGCGACGGACGTGTGTTGAGGAGA------GAGAAGAGTAGGC 337793
Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191
| || ||||| |||||| ||| ||||| || ||||| ||||||||||| ||| |
Sbjct 337792 ACGCGAAGTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGC 337733
Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251
| ||||||| || | || || | |||||| || | |||||| || || ||||||||||
Sbjct 337732 CGGGCATGAGGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGA 337673
Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311
|||| || || || ||||| || ||| | | | || | | ||| ||||||||||
Sbjct 337672 TGCCTTCTACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGGTCGAGTTTTTGTCTGAGA 337613
Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTT 48336
|||| || |||||||| |||||
Sbjct 337612 TCCACCGGAGAGCCCAGTCGGCCTT 337588
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931523938794240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |