Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq634 275 1e-68
seq46 127 4e-24
>seq634
Length=211807
Score = 275 bits (304), Expect = 1e-68
Identities = 741/1115 (66%), Gaps = 39/1115 (3%)
Strand=Plus/Plus
Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTC---GGCCTGGGCGCAAGACTGCGTCAGG 221422
|| ||||| | || || ||||| ||||| |||| | |||||||| || ||
Sbjct 36792 CCCTCGTAAGTTTCATATGGACCA---AGTTCCTTGGCCAGATCGCAAGACGATGTGAGA 36848
Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTG 221482
||||||||||||||||||||||||||| ||||||| || | || |||||||| |
Sbjct 36849 GCAGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCG 36908
Query 221483 AAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGC 221542
||||||| ||||| | ||| | || || || ||||| ||||| | ||||| |||
Sbjct 36909 AAGGGCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGC 36968
Query 221543 CTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCGATCA 221600
|||||||| |||| | ||| ||||| || || || || ||||| ||||| |
Sbjct 36969 CTGTGTCTGAAGTTGCTGTTGCGA--GCTTCAGGAACCGGGTAGTGATTGACCTCGATAA 37026
Query 221601 GATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACA 221660
||||| || || |||||| ||| | || || ||| ||||||||| ||
Sbjct 37027 TCTTGTTCAGATTACGAGTGACGACCTGGACGACTTCGTGGAGCTTCTGGAAAT------ 37080
Query 221661 CCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGT 221720
| ||||||| | || || | | |||||| | || || |||| ||||| ||
Sbjct 37081 CATACTCGCCAC-GT--TGCATG---TCCACATACGCAGGGAGTGCAAGCGAGGCCAAGT 37134
Query 221721 TACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTT---GC 221777
| || ||||| ||||| || ||| |||| |||||||| || |||||||| ||
Sbjct 37135 TGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTTAGAGC 37194
Query 221778 TGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGA 221837
||| || || || |||| || || || ||||| ||| || ||||||||||
Sbjct 37195 TGCGA---ATAGTTCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCATCCTTGTAGA 37251
Query 221838 GCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGG 221897
||||| | || |||||||| ||| ||| | || || || |||||| | |||||
Sbjct 37252 GCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCT-TCTGG 37310
Query 221898 -CGCTCACCGTCCTCTTGACTGCA-CCCTCGGTCTTTTCATACCCGGTATAGAGCATGTC 221955
||| ||| ||| ||| | | || ||||||| || ||||| | ||| ||| ||
Sbjct 37311 GCGCGCACAGTC-TCTCGTCCGCGTCCCTCGGCCT---CATACTTGTGATACAGCTCCTC 37366
Query 221956 AAACTTTTCACCGTACGCCTCGTCCAGGCCTGGA-CACCTGGCGGGACACATCAGACTCC 222014
|||| || || || | ||| ||| || || | | |||| || | ||| |||
Sbjct 37367 GAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGG-CAGAAAAGAGTCC 37425
Query 222015 AGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGA 222074
| | || || | ||||| || |||||||||||| || |||||||| || | || |
Sbjct 37426 ACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACA 37485
Query 222075 GATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAA 222134
||| | || || ||| ||| ||| | ||| || | ||||| | || |||| |
Sbjct 37486 AATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGA 37545
Query 222135 TGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCT 222194
|| |||||||| ||||| || |||| ||| | ||| || || ||||| ||||||||||
Sbjct 37546 CATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCT 37605
Query 222195 GATCCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGAT 222253
| || | ||| | | | ||| ||| ||||| | || | || ||||||||
Sbjct 37606 GGTCGA-CATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGAC 37664
Query 222254 CGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCAGACATGCCG 222313
||||| || || ||||| | ||| ||| | | | | || | ||
Sbjct 37665 GTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGAACATTGAGACCA 37724
Query 222314 ATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTCC 222373
||||| || ||| || |||||||| ||||| |||| || ||||| |||||| ||
Sbjct 37725 ATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTCG 37784
Query 222374 ATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAACAG 222433
|| ||| ||||||| | | || || || || |||||||| | |||| | | |
Sbjct 37785 ATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCG 37844
Query 222434 GCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTA 222468
||||| || ||||| ||| |||||||| |||||
Sbjct 37845 GCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTA 37879
>seq46
Length=404262
Score = 127 bits (140), Expect = 4e-24
Identities = 296/454 (65%), Gaps = 25/454 (6%)
Strand=Plus/Plus
Query 25879 CGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATC 25938
|| || || ||||| || || || || |||||||| ||| |||||| || ||| |||||
Sbjct 337642 CGCCTCGTTGCCTTCGCCGCCGTAGAAGGCATCTTCTTCTCCGGTTCCTTCGCGTCCATC 337701
Query 25939 TTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGC 25998
|||||| | ||| || || ||||||||| || ||| |||||||| |||||
Sbjct 337702 TTCTGGTTGAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAACGAACTCATATCT 337761
Query 25999 AGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCAC 26058
| |||||||| | |||| || || || ||||| |||| | | || || ||
Sbjct 337762 CGTGACGAGGGCATGCACACCGACTTCGCGTGCCTACTCTTCTCTCTCC------TCAAC 337815
Query 26059 AAACCT---TCTCAAGAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAG 26115
| || | || ||| || ||| | ||||||| || ||||| |||||| |
Sbjct 337816 ACACGTCCGTCGCAAAAGGAAGTCGAGGCCATCATCACCGAAGCTGTCACCATCGAGCAA 337875
Query 26116 GAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGC 26175
||||| | | ||||||||| || |||||| ||
Sbjct 337876 GAGTTCCTCACAGAAGCTCTACCGTGTGCTCTTCTCGGCATGAACTCCAAGCTCATGTGC 337935
Query 26176 CAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGAC----- 26230
|| ||||| |||| || ||||||| ||||| | ||| |||| || |
Sbjct 337936 CAGTACATCGAGTTCGTCGCCGACCGCCTGCTCT------TGGCTCTCGGCAACCAAAAG 337989
Query 26231 -TCTACAGTACGCCT--AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGA 26287
|||||| ||||| ||||| |||||||| ||||| ||||| ||| ||| || ||||
Sbjct 337990 TTCTACA--ACGCCACCAACCCCTTCGACTTCATGGAGAACATCTCGCTGGCCGGTAAGA 338047
Query 26288 CCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321
| |||||||| || ||||||||||| || || ||
Sbjct 338048 CAAACTTCTTCGAGAAGAGGGTCGGTGATTACCA 338081
Score = 98.7 bits (108), Expect = 2e-15
Identities = 164/234 (70%), Gaps = 5/234 (2%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| || ||| ||||||||||||||||| |||||
Sbjct 337182 ATCTGGCAAATGTACAAGAAGGCCGAAGCCTCTTTTTGGACCGCCGAAGAGATCGATCTC 337241
Query 25537 GCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAGT-- 25594
|||| ||| | ||| |||| || | || || ||||| ||| || ||| |
Sbjct 337242 TCCAAAGACCTCCACGACTGGAACAAGCGATTGAACGACGACGAGCGCTTCTTCATCTCC 337301
Query 25595 -ACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653
|||| | || ||||| || ||||| || || || || |||||||| ||| |||| |
Sbjct 337302 CACGTCCTCGCCTTCTTCGCCGCCTCCGACGGCATCGTCAACGAGAACCTGGTCGAGCGC 337361
Query 25654 TTCACCAGGGAAGTGC-AGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706
|| | | | || |||| ||| | ||||| || |||||||| ||||||||
Sbjct 337362 TTTAGCGGAGAGGTGCAAGTGC-CCGAGGCGCGATGCTTCTACGGCTTCCAGAT 337414
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928835964363840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |