Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq634 264 1e-65 seq46 91.5 2e-13 >seq634 Length=211807 Score = 264 bits (292), Expect = 1e-65 Identities = 1127/1750 (64%), Gaps = 37/1750 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| ||||| ||||||| || || | ||||||||||| |||||||| || | | Sbjct 37969 CCACAACACATGCTCATGCGTGTAGCCGTTGGCATCCACGGCGAAGACATCGAGAAGGCC 37910 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||||||| || | |||||| | | || |||| ||||| | ||||| || || Sbjct 37909 ATCGAGACATACAACTACATGTCCAACAAATAC-TTCACACACGCGTCTCCAACGCTTTT 37851 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| || || ||||| | || ||||||||| |||||||| |||| | |||||| || Sbjct 37850 CAACGCCGGAACACCCAACCCACAGATGTCCTCCTGCTTCCTCATCGATATCAAGGATGA 37791 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || ||||| | || || | | ||| || ||||| ||| ||||| Sbjct 37790 CAGCATCGAAGGCATCTACGACACGCTGAAGACGTGCGCTATGATCTCCAAGACCGCTGG 37731 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGGA-CA 75508 |||||||| | | | ||| | | |||| ||| || |||| ||| | Sbjct 37730 CGGTATTGGTCTCAATGTTCATCGCATCCGTGCCACCGG--CTCATACATCGGTGGAACG 37673 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 || || || | || | || || |||||||| || | |||| ||| || || ||| Sbjct 37672 AACGGAACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACAACACCGCTCGTTAT 37613 Query 75569 GTAAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625 || | || | || | ||| || | |||| ||||| | || |||||||| Sbjct 37612 GTCGACCAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTCGAGCCATGGCAC 37553 Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685 |||||| || | | |||||||| | || ||||| || | |||||| || Sbjct 37552 GCCGATGTCTTTGGCTTCCTTGATCTTCGCAAGAACCATGGCAAGGAAGAGATCCGCGCC 37493 Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 | ||| | || | | ||||||||||| ||||| |||||||||||||| |||| | Sbjct 37492 CGTGATTTGTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGGGTCCAGGATAAT 37433 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 || | ||| |||||||||| || || | || || || | |||||| || || Sbjct 37432 GGAGAGTGGACTCTTTTCTGCCCGAACGAAGCCCCTGGGTTGGCCGACGTCTATGGCGAC 37373 Query 75806 GAGTTTGAAGCCCTCTA-CACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACC 75864 ||||| || | || || ||||| |||||| | ||||| | | | |||||| | Sbjct 37372 GAGTTCGAGGAGCTGTATCACAA-GTATGAGGCCGAGGGACGCGGACGAGAGACTGTGCG 37314 Query 75865 AGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATA 75923 ||| | || | | ||| | || || ||| | | ||||| |||||||||| || |||| Sbjct 37313 CGCC-CAGAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGACTGGAAACCCGTATA 37255 Query 75924 TGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGA 75983 |||| ||||||||||| || ||| || || ||||| ||||| | ||||| || | Sbjct 37254 TGCTCTACAAGGATGCATGCAACCGCAAAAGCAACCAGAAGAACCTCGGAACTATTCGCA 37195 Query 75984 GCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCA 76043 |||| || || ||||| || || | |||||||| | |||||| || || |||| Sbjct 37194 GCTCTAACCTCTGCACCGAGATCATTGAGTACACCGCACCCGATGAGGTTGCCGTCTGCA 37135 Query 76044 ATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGAC-TCGCACTTTTGATTAT 76102 | ||||| || | || || || |||||| | | | || | || | ||||| Sbjct 37134 ACTTGGCCTCGCTTGCACTCCCTGCGTATGTGGA-CATGCAACGTGGCGAGTATGATTTC 37076 Query 76103 GAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGA 76162 | || || || ||| || || | || || ||||| ||| | || || Sbjct 37075 CAGAAGCTCCACGAAGTCGTCCAGGTCGTCACTCGTAATCTGAACAAGATTATCGAGGTC 37016 Query 76163 AATTTTTATCCCGT---TGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGT 76219 ||| || || || ||| || ||| | || || | ||||||| ||| | ||| Sbjct 37015 AATCACTACCCGGTTCCTGAAGCT-CGCAACAG--CAACTTCAGACACAGGCCTGTCGGT 36959 Query 76220 TTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCAGA 76278 | || || || ||||| ||||||| || | ||| || | | || || || Sbjct 36958 CTTGGAGTCCAGGGTCTTGCGGATGCCTTCCTCGCCCTGCGCCTGC-CCTTCGACTCTCC 36900 Query 76279 TGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGC 76338 ||||| | | || | || | | |||||||| ||||| || ||||| | || | Sbjct 36899 CGAAGCAAGGAAGCTCAACACCCAGATCTTTGAGACCATCTACCACGCTGCTCTCACATC 36840 Query 76339 GAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTC 76398 | ||| || |||| | | | ||| | ||||| || | ||||| ||||| | || Sbjct 36839 GTCTTGCGATCTGGCCAAGGAACTTGGTCCATATGAAACTTACGAGGGCTCTCCTGTCTC 36780 Query 76399 CCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC-TCAACTACGACTGGG 76457 || || | ||||| | |||||||| |||| | | || | | | || ||||||| Sbjct 36779 GCAGGGCATACTTCAATATGATATGT-GGAATATCACGCCCACCGACCTCTGGGACTGGG 36721 Query 76458 ATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAA 76517 ||| |||||||| | ||| || | ||| |||| ||| || | | || || | Sbjct 36720 ATGCTCTCAAGGCAAAGATCGCACAGCATGGTGTTCGCAACTCGCTGCTTGTTGCCCCCA 36661 Query 76518 TGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGAACCATACACA 76576 |||| || |||||||| | |||| |||||| | | ||||||||||| |||||||| || Sbjct 36660 TGCCTACTGCCTCCACATCCCAAATTCTTGGCT-ACAATGAATGCTTCGAACCATATACC 36602 Query 76577 ACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTC 76636 | ||||||||| | | | || || ||||| | |||||| ||| Sbjct 36601 TCCAACATCTACTCCCGCCGTGTTTTGGCCGGCGAGTTCCAGGTCGTCAACCCCTGGCTC 36542 Query 76637 GTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAA 76696 | || || | | || || || ||||| | | |||||| | | ||| | Sbjct 36541 CTGAAGGATTTGGTTGACATGGGCCTGTGGTCTGACAACATGAAGAACCGCATCATCGCC 36482 Query 76697 GCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGC 76756 | ||||||||||| || | || | | || || ||||| |||||| || ||| Sbjct 36481 GATGGTGGTTCCATCCAGAGGATTCCTAACATTCCCGATGAAATCAAGGCGCTATACAAG 36422 Query 76757 ACAGTGTGGGAAAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGC 76813 || ||||||||||| | || | | | ||||| | |||||||| || ||||| | Sbjct 36421 ACCGTGTGGGAAATCTCCCAG-CGTACCA--TCATTCAGATGGCCGCTGACCGTGGCGCC 36365 Query 76814 TTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGC 76871 ||||| |||| |||| ||| | || | |||| | || || ||| |||| Sbjct 36364 TTCATCGATC--AGTCCCAGTCGCTCAACATTCACATGAAGGAGCCTACCATGGGCAAGA 36307 Query 76872 TCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTCC 76931 | | || ||||| | || ||||| | || ||||| ||||| | ||||| |||| Sbjct 36306 TTACATCGATGCACTTCGCCGGATGGAAGCTTGGTCTCAAGACCGGCCTCTACTACCTCC 36247 Query 76932 GATCAAAGGC 76941 || ||| ||| Sbjct 36246 GAACAATGGC 36237 >seq46 Length=404262 Score = 91.5 bits (100), Expect = 2e-13 Identities = 310/473 (66%), Gaps = 25/473 (5%) Strand=Plus/Plus Query 65056 ACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTC 65115 ||||| |||| |||| || | ||||| |||| || || || || || |||||| Sbjct 337619 ACAAAAACTCGA-CCTTTGCGAACCGCCTCGTTGCCTTCGCCGCCGTAGAAGGCATCTTC 337677 Query 65116 TTCTCCGGGTCATTCTGCG-CTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCT 65174 |||||||| || ||| ||| | || | |||||||||||||| || |||||||| ||||| Sbjct 337678 TTCTCCGGTTCCTTC-GCGTCCATCTTCTGGTTGAAGAAGCGCGGCCTCATGCCCGGCCT 337736 Query 65175 ATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTG-G 65233 |||||| || ||||| || || || || ||||| | ||| || || | |||| Sbjct 337737 CACCTTCTCCAACGAACTCATATCTCGTGACGAGGGCATGCACACCGACTTCG-CGTGCC 337795 Query 65234 AGCTCTTCAAGACTTTGCGTAATAGAC-CCACTACCGAAACTA--TCCACGCCATCGTGA 65290 |||||| || | | || | || | | | ||| | || | |||||| | | Sbjct 337796 TACTCTTC---TCTCTCCTCAACACACGTCCGTCGCAAAAGGAAGTCGAGGCCATCATCA 337852 Query 65291 AAGAGGCGGTTGAGATTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAATCTCATCG 65350 || || || || ||| ||| |||| || || || || || ||| ||| ||| Sbjct 337853 CCGAAGCTGTCACCATCGAGCAAGAGTTCCTCACAGAAGCTCTACCGTGTGCTCTTCTCG 337912 Query 65351 GTATGAACTCTGAGAAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAAC 65410 | |||||||| || |||| | ||||||| |||| || | || || || ||| Sbjct 337913 GCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTGCTC---- 337968 Query 65411 AAGTTGG--GGTGCCACCCA-----TTTGGAACGCGAAGAATCCATTTGACTTTATGGAA 65463 |||| | || ||| | | ||||| | || || || ||||| ||||| Sbjct 337969 ---TTGGCTCTCGGCAACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGAG 338025 Query 65464 AACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAAGCGAGTTGGGGACTA 65516 ||||| || | || ||||| |||||||| |||||| | || || || || Sbjct 338026 AACATCTCGCTGGCCGGTAAGACAAACTTCTTCGAGAAGAGGGTCGGTGATTA 338078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596563925131680