Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq146 114 4e-20 >seq146 Length=312205 Score = 114 bits (126), Expect = 4e-20 Identities = 332/508 (65%), Gaps = 10/508 (2%) Strand=Plus/Minus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||| || | |||||| |||||||| ||||| || ||||| || | ||||| || ||| Sbjct 88267 GCACCATGAGCAATCATGCAATCACGTTCCATCTCTCCGAACCGCAAGCCACCGTCTCGA 88208 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604 ||||||||||| | ||||| | || ||| | || || ||| | || ||| Sbjct 88207 GCCCTACCCTCCACCGGCTGTCTCGTCAGAATCTGCAGCGGGCCGCGCGCACGAGCATGA 88148 Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA----T 251660 ||| || | ||||||||| | || ||||||||| ||| ||||| | ||||| | Sbjct 88147 ATCTTGTCGTCAACCATATGCCTCAGGCGCTGGTAGTATGTCGGACCCAGGAAGACTTGT 88088 Query 251661 GCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720 ||||| || || || || || | |||||||||| || ||| ||| || | Sbjct 88087 GCTCGGAG----TTTCTTGCCGGTGTGCCCGTTATACATGACCTCGAAGCCACGTGACTG 88032 Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGT 251780 || ||| | | | ||| | | | | | | | ||| | | | || ||| Sbjct 88031 GTACCCATGCTCCCTAAGCAGTTTGGACACACCTTCGACGGTGACATCGGTGAAGGGGGT 87972 Query 251781 GCCGTCTCCGTAA-AGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTCAGTT 251839 |||| || | || | | | | | | |||||| | ||| ||| | | Sbjct 87971 TGCGTCGCCTTCGCAGCCACGGAGGGAGCCA-ACTTTGGAGAGAAGGCACTCGACTAAAT 87913 Query 251840 GGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTC 251899 ||||||| ||||||||| ||||| || |||||||||||||||||||| || | |||| Sbjct 87912 GGGCGATGGTCATACGAGACGGAATGGCGTGGGGATTGATGATGATGTCAGGGGTGAGTC 87853 Query 251900 CATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGTTTCCAATAGTTCCCTTTTGTC 251959 | || |||||| ||||| || | | || || | || || || |||||||||| Sbjct 87852 CTTCCCGAGTGAAAGGCATGTCTTCCTGCTTGTAGGTGATACCGATCGTACCCTTTTGTC 87793 Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987 ||||||| || ||||| || ||||| Sbjct 87792 CGTGACGTGAGGCAAACTTGTCGCCAAT 87765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471803249318457