Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq146 114 4e-20
>seq146
Length=312205
Score = 114 bits (126), Expect = 4e-20
Identities = 332/508 (65%), Gaps = 10/508 (2%)
Strand=Plus/Minus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| || | |||||| |||||||| ||||| || ||||| || | ||||| || |||
Sbjct 88267 GCACCATGAGCAATCATGCAATCACGTTCCATCTCTCCGAACCGCAAGCCACCGTCTCGA 88208
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGT 251604
||||||||||| | ||||| | || ||| | || || ||| | || |||
Sbjct 88207 GCCCTACCCTCCACCGGCTGTCTCGTCAGAATCTGCAGCGGGCCGCGCGCACGAGCATGA 88148
Query 251605 TGCTTATCATTTACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA----T 251660
||| || | ||||||||| | || ||||||||| ||| ||||| | ||||| |
Sbjct 88147 ATCTTGTCGTCAACCATATGCCTCAGGCGCTGGTAGTATGTCGGACCCAGGAAGACTTGT 88088
Query 251661 GCTCGAAGGCATTTGCTCTCCAGTTAGAGCGTTATACATAACTTCGTTTCCATTAGATTC 251720
||||| || || || || || | |||||||||| || ||| ||| || |
Sbjct 88087 GCTCGGAG----TTTCTTGCCGGTGTGCCCGTTATACATGACCTCGAAGCCACGTGACTG 88032
Query 251721 ATAACCAAGTTTCTGTAGCTCTGAAGCAATATCACCAATCTTGAATTTGCTAAAACTGGT 251780
|| ||| | | | ||| | | | | | | | ||| | | | || |||
Sbjct 88031 GTACCCATGCTCCCTAAGCAGTTTGGACACACCTTCGACGGTGACATCGGTGAAGGGGGT 87972
Query 251781 GCCGTCTCCGTAA-AGACCCATTTGAATCAACACTTTGCCTAAAAGTGTCTCTTTCAGTT 251839
|||| || | || | | | | | | |||||| | ||| ||| | |
Sbjct 87971 TGCGTCGCCTTCGCAGCCACGGAGGGAGCCA-ACTTTGGAGAGAAGGCACTCGACTAAAT 87913
Query 251840 GGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTC 251899
||||||| ||||||||| ||||| || |||||||||||||||||||| || | ||||
Sbjct 87912 GGGCGATGGTCATACGAGACGGAATGGCGTGGGGATTGATGATGATGTCAGGGGTGAGTC 87853
Query 251900 CATCAGCAGTGAAGGGCATATCCTTTTCCTCAATAATGTTTCCAATAGTTCCCTTTTGTC 251959
| || |||||| ||||| || | | || || | || || || ||||||||||
Sbjct 87852 CTTCCCGAGTGAAAGGCATGTCTTCCTGCTTGTAGGTGATACCGATCGTACCCTTTTGTC 87793
Query 251960 CGTGACGAGAACTGAACTTATCACCAAT 251987
||||||| || ||||| || |||||
Sbjct 87792 CGTGACGTGAGGCAAACTTGTCGCCAAT 87765
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471803249318457
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |