Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq46 149 8e-30
seq113 136 5e-26
seq634 134 2e-25
seq78 96.9 4e-14
seq755 95.1 1e-13
>seq46
Length=404262
Score = 149 bits (164), Expect = 8e-30
Identities = 185/253 (73%), Gaps = 3/253 (1%)
Strand=Plus/Minus
Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690
|||||||||||||||| || ||||||||||||||| ||| | | |||| | |||||
Sbjct 337437 CCGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCGCGCCTCGGGCACTT 337378
Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750
| ||||| | || || || ||||||||||| |||||||||||| ||||||||
Sbjct 337377 GCACCTCTCCGCTAAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCGGAGGCGGCGA 337318
Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGA---GCGACACCCAGT 869807
| || || |||||||| ||| ||| ||||||||||||| | | || |||||
Sbjct 337317 AGAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAATCGCTTGTTCCAGT 337258
Query 869808 GGACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTT 869867
| | ||| | ||| || | ||| ||||||||||| | ||||| |||||||| |
Sbjct 337257 CGTGGAGGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAAAGAGGCTTCGGCCTTCT 337198
Query 869868 TGTACATCTCCCA 869880
||||||| | |||
Sbjct 337197 TGTACATTTGCCA 337185
Score = 134 bits (148), Expect = 2e-25
Identities = 175/242 (72%), Gaps = 0/242 (0%)
Strand=Plus/Minus
Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750
||||| ||| || || || | | |||||| ||||| ||||| || | ||||||||
Sbjct 338087 GCCTTCTGGTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATG 338028
Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCG 868810
|||||| | ||| ||||||| | |||||| ||||| | ||||| | | |
Sbjct 338027 TTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGAGAGCCAAG 337968
Query 868811 AGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATG 868870
||||||||||||||||| ||||||||||||||||||||||| || |||||||||||
Sbjct 337967 AGCAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGA 337908
Query 868871 AGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATG 868930
|| || ||| || | || | | ||||||| |||||| ||| || ||| ||||
Sbjct 337907 AGAGCACACGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATG 337848
Query 868931 AT 868932
||
Sbjct 337847 AT 337846
Score = 113 bits (124), Expect = 6e-19
Identities = 143/192 (74%), Gaps = 11/192 (6%)
Strand=Plus/Minus
Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239
|| ||||| ||| || | ||||||| |||| |||||||||||||||||||||||||
Sbjct 337772 CCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTC 337713
Query 869240 TTGAGCCAAAAGATGG-CGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
|| | ||| ||||||| ||| ||| || ||||| |||||||| || |||||||| ||
Sbjct 337712 TTCAACCAGAAGATGGACGC-GAAGGAACCGGAGAAGAAGATGCCTTCTACGGCGGCGAA 337654
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT---TGATCCACTTCATCGC 869355
| | | ||| || | |||||| |||||| | |||| ||||||| | ||
Sbjct 337653 GGCAACGAGGCGGTTCGCAAAG--GTCGAG----TTTTTGTCTGAGATCCACCGGAGAGC 337600
Query 869356 CCAGTCGGCCTT 869367
||||||||||||
Sbjct 337599 CCAGTCGGCCTT 337588
>seq113
Length=352843
Score = 136 bits (150), Expect = 5e-26
Identities = 99/115 (86%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| ||||||||||||||||||||| |||| ||||| | || |||||| | || ||||||
Sbjct 76280 GCTGCCAACTACCTCGACATCAAGGCTCTCCTCGACGTGGGCTGCAAGACGGTCGCCAAC 76221
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAAGTACG 1592300
|||||||||||||||||||| || |||||||||||||| || |||||| || |||
Sbjct 76220 ATGATCAAGGGCAAGTCGCCGGATGAGATCCGCAAGACATTCAACATCCAGAACG 76166
>seq634
Length=211807
Score = 134 bits (148), Expect = 2e-25
Identities = 188/264 (71%), Gaps = 0/264 (0%)
Strand=Plus/Plus
Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124
||||||||| || || || |||| |||| |||| || ||||| || | ||||||||||||
Sbjct 37604 CTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGA 37663
Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184
| ||||| || || | | ||| | ||||| ||| || | || | | ||
Sbjct 37664 CGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGAACATTGAGACC 37723
Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244
|| ||||| || | ||||||||| | |||||| || ||||||||||||||||| ||
Sbjct 37724 AATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTC 37783
Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304
||| ||| |||| || || | ||| ||||| || || | || |||| | || ||
Sbjct 37784 GATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCC 37843
Query 1630305 GGCGTTGAAGAGCGTGGGCGTCGC 1630328
||||||||| ||||| || | |||
Sbjct 37844 GGCGTTGAAAAGCGTTGGAGACGC 37867
>seq78
Length=92384
Score = 96.9 bits (106), Expect = 4e-14
Identities = 224/335 (67%), Gaps = 2/335 (1%)
Strand=Plus/Minus
Query 1573901 GCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTGTCCTCTTGGGCGCGGC 1573960
||| |||| || ||||| || ||| || || ||||| ||| | |||| ||
Sbjct 8910 GCCAGGCATCGGTAAGACGACCTCGATCCTCTGCCTCGCGCGCCAGCTCCTCGGCGACGC 8851
Query 1573961 CGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCGGCGTCGACGTCGTGCG 1574020
| | | || ||||| ||||||||||| || || |||||||||||| |||||||||| ||
Sbjct 8850 CTACAAGGAAGCCGTCCTCGAACTCAATGCCTCAGACGAGCGCGGCATCGACGTCGTACG 8791
Query 1574021 CAAGATCATCAAGCACCACGCCTCCAAGAGGATCGACCTGCCGCCCGGACGCCACAAGGT 1574080
||| || ||| | || |||| || || ||||| || | || || |
Sbjct 8790 CAACCGGATAAAGGGCTTTGCGCAGAAGAAAGTCACGCTTCCGCCTGGGAGACAGAAACT 8731
Query 1574081 GATCATCCTCGACGAGGCCGACTGCCTCACG-TCGGCGGCCCAGCAGGCCCTGCGGTCCA 1574139
| | ||||| |||||||| ||| || | ||| |||| || || ||||| || | ||
Sbjct 8730 GGTTATCCTGGACGAGGCGGACAGCATGACGAGCGGC-GCGCAACAGGCGCTAAGACGCA 8672
Query 1574140 CCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTGCAACACGTCGTCGATGG 1574199
| ||||| | | | | || ||| | ||||| | |||||||| |||| | |
Sbjct 8671 CAATGGAGATTTATAGCGCGACAACGAGGTTTGCGTTTGCGTGCAATCAGTCGAATAAGA 8612
Query 1574200 TCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTG 1574234
|||||||| | ||||| || ||||||||| ||
Sbjct 8611 TCATCGAGCCGCTCCAGTCACGTTGCGCCATTTTG 8577
>seq755
Length=163263
Score = 95.1 bits (104), Expect = 1e-13
Identities = 106/139 (76%), Gaps = 2/139 (1%)
Strand=Plus/Minus
Query 19047 GACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAAC-GTGCCGGCAGGCCTCGGCGA 19105
|||||||||||||| || || || || ||| ||| || | || || ||||| |||||
Sbjct 129327 GACAGCATCGGCGGGACCGTTACATGTGTGATTCGGAATTGCCCCAGC-GGCCTGGGCGA 129269
Query 19106 GCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCAC 19165
||| ||||| |||||| |||||||| | || || ||||||||||| || || |||||
Sbjct 129268 GCCTTGCTTCGACAAGCTCGAGGCCACTCTTGCGCACGCCATGCTCAGCATTCCCGCCAC 129209
Query 19166 CAAGGGATTCGAGATTGGC 19184
|| | |||||||| |||
Sbjct 129208 GAAAGCCTTCGAGATCGGC 129190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107076748776237
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |