Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq634 123 2e-23
seq412 113 4e-20
seq738 93.3 4e-14
>seq634
Length=211807
Score = 123 bits (136), Expect = 2e-23
Identities = 607/945 (64%), Gaps = 31/945 (3%)
Strand=Plus/Plus
Query 139080 AATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGC 139139
|| |||||| | |||||| || || || || ||||| || |||| || | || ||||
Sbjct 37121 AAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGT 37180
Query 139140 ACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGC 139199
|| | ||| | || || || | || | || |||||||| ||||| || ||
Sbjct 37181 GCAGAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGC 37240
Query 139200 ATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAA 139259
||| ||||| ||||||||||| | ||||| || || | ||| | ||| | |
Sbjct 37241 ATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCA 37300
Query 139260 CAAGTCCCTAGCTTGTATTTGACGCACGTAAA-GTTCGTCGCGCTCGTACTTTTCGTAGA 139318
| | | || | | | | | ||| || | ||| ||| ||||| | || |
Sbjct 37301 GAGCTTCTGGGCGCGCACA-GTCTCTCGTCCGCGTCCCTCGGCCTCATACTTGTGATACA 37359
Query 139319 GTTCGTCGAA-TCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTT-GTCAGGACACAT 139376
| || ||||| |||| | || ||| |||| | | | | | ||| || || || |
Sbjct 37360 GCTCCTCGAACTCGT-CGCCATAGACGTCGGCCA-ACCCAGGGGCTTCGTTCGGGCAGAA 37417
Query 139377 GAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGC 139436
|| | ||| | || || ||| ||| ||| ||||||| || || |||||||||| |||
Sbjct 37418 AAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGC 37477
Query 139437 GAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTT-AAGGA 139495
| | | |||||| || || | |||||| || ||| | | | | | | |||||
Sbjct 37478 GTAGAACAAATCACGGGCGCGGATCTCTTCCTTGCC-ATGGTTCTTGCGAAGATCAAGGA 37536
Query 139496 AATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCCTTTCCG---TT 139552
| |||| || || ||||||||||| || || |||||||| | || ||| || |
Sbjct 37537 AGCCAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTAT 37596
Query 139553 TGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGAC 139612
||||||| || ||||| | || | | || || | || || | ||| || || |
Sbjct 37597 TGCCACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGC 37656
Query 139613 CGCTCGCTGTTCCGTTGGTGCTACGGATG---GGACTGTTGCGAGCTCGGACGTCATGTA 139669
|| | | |||||||| || | || |||| | | | || || |||| | ||| |
Sbjct 37657 CGTTGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTG---GCACGGATGCGATGAA 37713
Query 139670 CATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT--AATGTCTC 139727
|||||| || || ||||| | ||||| || | | |||| || | | || ||
Sbjct 37714 CATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCA--CGTCTTCAGCGTGTC 37771
Query 139728 GTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGG 139787
||| || ||| |||||||| |||| || || || ||||| || || | || ||
Sbjct 37772 GTAGATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGG 37831
Query 139788 TAGTTTCGTG--CCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGA 139844
||| ||| ||||| || || || ||| |||||| ||||| ||||| || ||
Sbjct 37832 --GTTGGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTTG-TTGGA 37888
Query 139845 CATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGAC 139904
||| | | ||| || |||||||| || | || || |||||||| || || | ||
Sbjct 37889 CATGTAGTTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTAC 37948
Query 139905 TCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATA--A 139962
||||| ||||| ||||| || || || | | ||| | || ||||| |
Sbjct 37949 ACGCATGAGCATGTGTTGTGGACGCTCAGCAATCTTGCCGTTTATGCGGAGGAGATATGA 38008
Query 139963 CCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATCG 140007
||| || |||||||| |||||||| || |||||||| |||
Sbjct 38009 GCGT--TCCAGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCG 38051
>seq412
Length=249799
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || ||||| || || || | ||
Sbjct 4298 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGACGATCACGCTAGAGGTTGAGTCGTCC 4239
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | || | || || |||||||| || ||||| || || || || || ||
Sbjct 4238 GACACAATCGACAACGTGAAGTCCAAGATCCAGGATAAAGAGGGTATTCCCCCGGACCAG 4179
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|||||| | |||||||| || || ||| ||||||| ||| | || || || |||
Sbjct 4178 CAACGTCTCATCTTTGCTGGTAAGCAGTTGGAGGACGGCCGAACGCTCTCGGACTACAAC 4119
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
|| || ||||| ||||| || |||||||||
Sbjct 4118 ATCCAGAAGGAGTCGACTCTGCACTTGGTG 4089
Score = 107 bits (118), Expect = 2e-18
Identities = 162/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || ||||| || ||||| || || | ||
Sbjct 4526 ATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCC 4467
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| || | || |||| ||| ||||| || || || || || || || || || |||||
Sbjct 4466 GATACCATCGACAACGTCAAATCAAAA-ATTCAGGATAAGGAGGGCATTCCCCCGGATCA 4408
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| ||| | ||||| ||||| || ||||| || ||| | | | |||| || || ||
Sbjct 4407 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAA 4348
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || || || || || || |||||||| |||| |||| || ||
Sbjct 4347 CATCCAGAAAGAGTCCACCCTCCACTTGGTTCTGCGTCTGCGAGGTGG 4300
>seq738
Length=174967
Score = 93.3 bits (102), Expect = 4e-14
Identities = 96/126 (76%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 24788 AAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAA 24847
||||| || ||||| || || || || || || ||||| ||||||||||| ||||| ||
Sbjct 25371 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGTTTGATCTTCGCCGGCAAG 25312
Query 24848 CAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACAC 24907
||||| |||||| | | | | || || || ||||| || ||||| ||||| || |||
Sbjct 25311 CAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACTCTGCAC 25252
Query 24908 TTGGTG 24913
||||||
Sbjct 25251 TTGGTG 25246
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449893320349080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |