Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq78 134 2e-25
seq46 134 2e-25
seq113 131 3e-24
seq634 120 5e-21
>seq78
Length=92384
Score = 134 bits (148), Expect = 2e-25
Identities = 272/399 (68%), Gaps = 6/399 (2%)
Strand=Plus/Minus
Query 2019003 GACGGCAACATGCCCAACCTCTTGCTGGCGGGCCCGCCCGGCACGGGCAAGACCACGAGC 2019062
||||| |||||||| || || | | | ||| ||| |||| || ||||| ||
Sbjct 8945 GACGGGAACATGCCGCACGTCATCATATCCGGCATGCCAGGCATCGGTAAGACGACCTCG 8886
Query 2019063 ATCGCGTGCCTGGCGCGCGTGCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTC 2019122
||| ||||| |||||| |||| | |||| ||| | | || ||||| |||||||||
Sbjct 8885 ATCCTCTGCCTCGCGCGCCAGCTCCTCGGCGACGCCTACAAGGAAGCCGTCCTCGAACTC 8826
Query 2019123 AATGCGTCAGACGAGCGCGGCGTGGACGTCGTGCGTAGAATCATCAA--GCATCACGCTT 2019180
||||| ||||||||||||||| | |||||||| || | || || || | |||
Sbjct 8825 AATGCCTCAGACGAGCGCGGCATCGACGTCGTACGCAACCGGATAAAGGGCTTTGCGC-- 8768
Query 2019181 CGAAAAGAATCGACCTGCCGCCCGGCCGCCACAAGGTGATCATCCTCGATGAGGCCGACT 2019240
||| | | || || ||||| || | || || || | ||||| || ||||| |||
Sbjct 8767 AGAAGAAAGTCACGCTTCCGCCTGGGAGACAGAAACTGGTTATCCTGGACGAGGCGGACA 8708
Query 2019241 GCCTTACG-TCGGCGGCCCAGCAGGCCCTCCGATCGACCATGGAAAAGTACACCAACACG 2019299
|| | ||| |||| || || ||||| || || || ||||| | || | | ||
Sbjct 8707 GCATGACGAGCGGC-GCGCAACAGGCGCTAAGACGCACAATGGAGATTTATAGCGCGACA 8649
Query 2019300 ACGCGGTTTGCGCTGGCCTGCAACACGTCGTCGATGGTCATCGAAGCCCTCCAGAGCCGT 2019359
||| |||||||| | || ||||| |||| | | ||||||| | |||||| |||
Sbjct 8648 ACGAGGTTTGCGTTTGCGTGCAATCAGTCGAATAAGATCATCGAGCCGCTCCAGTCACGT 8589
Query 2019360 TGCGCCATCTTGCGCTTTGCGCGCCTCACCGACGCCCAG 2019398
|||||||| ||| | | || || || ||||| || |||
Sbjct 8588 TGCGCCATTTTGAGATACGCCCGTCTTACCGATGCGCAG 8550
>seq46
Length=404262
Score = 134 bits (148), Expect = 2e-25
Identities = 156/210 (74%), Gaps = 3/210 (1%)
Strand=Plus/Minus
Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209
|||||||| ||||| ||||| | ||||| || |||||||||| |||||||||
Sbjct 337390 GCCTCGGGCACTTGCACCTCTCCGCTAAAGCGCTCGACCAGGTTCTCGTTGACGATGCCG 337331
Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGA-- 796267
||| ||||||||| |||||||||||||| ||| ||| |||||||||||| | |
Sbjct 337330 TCGGAGGCGGCGAAGAAGGCGAGGACGTGGGAGATGAAGAAGCGCTCGTCGTCGTTCAAT 337271
Query 796268 -GCGAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAG 796326
|| | ||||| | ||| | ||| |||| ||| |||||||||||||| |||
Sbjct 337270 CGCTTGTTCCAGTCGTGGAGGTCTTTGGAGAGATCGATCTCTTCGGCGGTCCAAAAAGAG 337211
Query 796327 GCCTCGGCCTTTTTGTACATCTCCCATATC 796356
|| |||||||| |||||||| | ||| |||
Sbjct 337210 GCTTCGGCCTTCTTGTACATTTGCCAGATC 337181
Score = 122 bits (134), Expect = 1e-21
Identities = 179/251 (71%), Gaps = 2/251 (1%)
Strand=Plus/Minus
Query 793891 TGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGA 793950
|||| || ||||| || || || || | | |||||| ||||| ||||| || | |
Sbjct 338095 TGACACCGGCCTTCTGGTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCA 338036
Query 793951 GCGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGA 794010
||||||| |||||| | ||| ||||||| | |||| ||| | | ||||
Sbjct 338035 GCGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGA 337976
Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070
| | | |||||||||||||||||||| || ||||||||||||||||| || |||||
Sbjct 337975 GAGCCAAGAGCAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCA 337916
Query 794071 TGCCGATGAGCGC-CACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCC 794129
|||||| || || ||| || || | || ||| ||||||| |||||| ||| ||
Sbjct 337915 TGCCGAGAAGAGCACAC-GGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCT 337857
Query 794130 TCGATGATGAT 794140
||| |||||||
Sbjct 337856 TCGGTGATGAT 337846
Score = 100 bits (110), Expect = 5e-15
Identities = 108/143 (76%), Gaps = 0/143 (0%)
Strand=Plus/Minus
Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400
|| ||||| ||| || | ||||||| ||| |||||||||||||||||||||||||
Sbjct 337772 CCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTC 337713
Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460
|| | ||| ||||||| ||| || ||||| |||||||| || |||||||| |||
Sbjct 337712 TTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGATGCCTTCTACGGCGGCGAAG 337653
Query 794461 CCGACGAGCCGCTCGGCAAAAGT 794483
| ||||| || | ||||| ||
Sbjct 337652 GCAACGAGGCGGTTCGCAAAGGT 337630
>seq113
Length=352843
Score = 131 bits (144), Expect = 3e-24
Identities = 98/115 (85%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 2035647 GCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGGTGCAAGACCGTGGCCAAC 2035706
|| ||||||||||||||||||||| | |||||||| |||| |||||||| || ||||||
Sbjct 76280 GCTGCCAACTACCTCGACATCAAGGCTCTCCTCGACGTGGGCTGCAAGACGGTCGCCAAC 76221
Query 2035707 CTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTTAACATCAAGTACG 2035761
| ||||||||||||||||| || || ||||||||||| || |||||| || |||
Sbjct 76220 ATGATCAAGGGCAAGTCGCCGGATGAGATCCGCAAGACATTCAACATCCAGAACG 76166
>seq634
Length=211807
Score = 120 bits (132), Expect = 5e-21
Identities = 185/264 (70%), Gaps = 0/264 (0%)
Strand=Plus/Plus
Query 2073540 CTGGTCGACATAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACAAGGCCGTTGGA 2073599
|||||||||||| || || |||| |||| |||| || ||||| || | |||||||||||
Sbjct 37604 CTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGA 37663
Query 2073600 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCCGAGGCGCGCACCTTGTGCGCGGCAAAGCC 2073659
| ||||| || || | | ||| | ||| | ||| || | || | | ||
Sbjct 37664 CGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGATGCGATGAACATTGAGACC 37723
Query 2073660 GATGCCGCCGGCCGCCTTGGAGATGAGCGCGCACTTTTTCAGCGTCTCGTAGATGCCCTC 2073719
|| ||||| || | ||||||||| | |||||| | |||||||| ||||||||||| ||
Sbjct 37724 AATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTC 37783
Query 2073720 GATCGAGTCGGCCTTCATGTCCAACAGAAAGCACGACGAGTTTTGCGGGCGCGCCGTGCC 2073779
||| ||| |||| || || | || ||||| || || | || ||| | || ||
Sbjct 37784 GATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCC 37843
Query 2073780 GGCATTGAAGAGCGTGGGCGTCGC 2073803
||| ||||| ||||| || | |||
Sbjct 37844 GGCGTTGAAAAGCGTTGGAGACGC 37867
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7916165448959079
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |