Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq412 123 2e-23
seq11 107 1e-18
seq738 84.2 1e-11
>seq412
Length=249799
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824
||| |||| ||| | |||| ||| ||||| ||||| ||||| || ||| |||| ||||
Sbjct 4314 CAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATC 4373
Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || ||||| ||||||||||| || || ||||| || | || | |||||||| ||
Sbjct 4374 TTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATC 4433
Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944
| |||||| ||||||| | || | || | ||| || || | ||| || ||
Sbjct 4434 CTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATAGT 4493
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
||| || || |||||||| || |||||||||||
Sbjct 4494 CTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Score = 118 bits (130), Expect = 7e-22
Identities = 143/195 (73%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || || | ||| ||||||||||||||| ||||| || ||| |||| ||||
Sbjct 4543 AGGACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCATCC 4602
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||||| ||| || |||||| | || | |||||||| ||
Sbjct 4603 TCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCC 4662
Query 34886 TTTATTTTTTGTTTGACG-----GATGCTATCGATTCATTGGCCTCGACATCAACGGTTA 34940
| || || ||||||| |||| ||||| | || ||||| |||| ||| |
Sbjct 4663 TGGATCTTCGATTTGACGTTGTCGATGGTATCGCTCGAT-----TCGACCTCAAGGGTAA 4717
Query 34941 TGGTCTTTCCCGTGA 34955
||||||| || ||||
Sbjct 4718 TGGTCTTACCGGTGA 4732
>seq11
Length=137347
Score = 107 bits (118), Expect = 1e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| ||| ||||||||| ||||| ||||| || ||| |||| | ||
Sbjct 124729 AGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCT 124788
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
|| || |||||||||||||||||||| || || |||||| | || | |||||||||||
Sbjct 124789 TCGAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTC 124847
>seq738
Length=174967
Score = 84.2 bits (92), Expect = 1e-11
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||||||||| ||||| ||||| || ||| |||| |||| || || ||||| ||||||||
Sbjct 25264 CTCCTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAA 25323
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884
||||| || || ||||| | || | |||||||||||
Sbjct 25324 GATCAAACGCTGTTGGTCCGGGGGAATGCCCTCCTTGTC 25362
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325689779301059
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |