Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq412 91.5 1e-13 >seq412 Length=249799 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| || || ||||| || | || ||||| || || ||| |||| |||| | Sbjct 4527 AATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTC 4468 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 |||||| ||| | | || ||| ||| ||| ||||| || ||| | ||| |||||| Sbjct 4467 CGATACCATCGACAACGTCAAATCAAAAATTCAGGATAAGGAGGGCATTCCCCCGGATCA 4408 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||| | || || | || || || ||||| || || | | || || | |||||||| Sbjct 4407 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAA 4348 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||| || || ||||| || | ||| |||| || | ||||||| || Sbjct 4347 CATCCAGAAAGAGTCCACCCTCCACTTGGTTCTGCGTCTGCGAGGTGG 4300 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || ||||| || | || ||||| || || || | || ||| | | Sbjct 4298 ATGCAGATCTTCGTCAAGACACTCACCGGCAAGACGATCACGCTAGAGGTTGAGTCGTCC 4239 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || ||| | | || || ||||| |||||||| || | ||| ||| ||| Sbjct 4238 GACACAATCGACAACGTGAAGTCCAAGATCCAGGATAAAGAGGGTATTCCCCCGGACCAG 4179 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || | || || | ||| ||||| ||| ||||||||| | ||| | ||||||||||| Sbjct 4178 CAACGTCTCATCTTTGCTGGTAAGCAGTTGGAGGACGGCCGAACGCTCTCGGACTACAAC 4119 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765 || || |||||||| || ||||| ||||| Sbjct 4118 ATCCAGAAGGAGTCGACTCTGCACTTGGTG 4089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398873100542329