Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq412 105 1e-17 >seq412 Length=249799 Score = 105 bits (116), Expect = 1e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||||||||| || || ||||| || || || || || || ||| || Sbjct 4083 ACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGGCC 4142 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || | || || ||||||||||| || | ||| || || || || || || || || Sbjct 4143 GTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGAATACCCTCTTT 4202 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||| || ||||| | || || || || || || || | || || || | || || Sbjct 4203 ATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACCTCTAGCGTGAT 4262 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||| || | ||||| || || |||||||| Sbjct 4263 CGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | |||||||| || || ||||| || || || || | Sbjct 4809 TACCACCGCGGAGACGAAGGACGAGATGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGG 4868 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | ||| | | || || || || || || || || || || | | ||||| || || | Sbjct 4869 ACAGAGTACGTCCATCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGTTGGTCAGGCG 4928 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | || ||||||||||| || ||||| | || ||||| |||||||| || | || | Sbjct 4929 GGATGCCTTCCTTATCCTGGATCTTCGACTTGACATTGTCAATCGTGTCCGAGGACTCCA 4988 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGT 82786 | ||||| || || |||||||| || Sbjct 4989 CCTCCAAGGTGATGGTCTTGCCGGT 5013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981817626877979