Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq634 232 6e-56 seq46 163 3e-35 seq412 127 2e-24 >seq634 Length=211807 Score = 232 bits (256), Expect = 6e-56 Identities = 1110/1738 (64%), Gaps = 65/1738 (4%) Strand=Plus/Plus Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTT 148108 ||||||| ||| || ||||| |||||||||||||||||||| | ||||| || |||| Sbjct 36344 CGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATGATGGTACGCTG 36403 Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168 || ||||| | |||||||| ||| |||||| | |||||||||| || Sbjct 36404 GGAG---ATTTCCCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATGTTAGGAAT 36460 Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228 | ||| | || || | | || | || | || ||| | ||| | | ||| Sbjct 36461 CCTCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGGCC 36520 Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288 | || | || || | | || | | || || ||||| ||||||||||| | || Sbjct 36521 CATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCCGGCCAAAAC 36580 Query 148289 GCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348 || || || | |||| ||| | ||||| || | || |||| ||| | ||| || Sbjct 36581 ACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGTAGCCAAGAATTTG 36640 Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408 | || | || || |||||| || || |||||||||||||| | ||| | | | Sbjct 36641 GGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACCATGCTGTGC 36700 Query 148409 TAT-TTTGCGCTTCAGAGCCGCCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACAT 148465 || ||||| ||| ||||| ||||||||||||| ||| | || || | |||||||| Sbjct 36701 GATCTTTGC-CTTGAGAGCATCCCAGTCCCAGAGGTCGGTG--GGCGTGATATTCCACAT 36757 Query 148466 GTCGTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524 || || || || ||||| | || || | || ||||||||| | || || || Sbjct 36758 ATCATATTGAAGTATGCC-CTGCGAGACAGGAGAGCCCTCGTAAGTTTCATATGGACCAA 36816 Query 148525 GCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTT 148584 | || ||||| ||||| || ||| || ||| ||| || ||||| || | Sbjct 36817 GTTCCTTGGCCAGATCGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCTCAAAGATCT 36876 Query 148585 GCCTGTTGAGCAGCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACG 148641 | |||||||| | || ||| ||| | |||| ||||| | || | Sbjct 36877 GGGTGTTGAGCTTCCTTGCT---TCGGGAGAGTCGAAGGGCAGGCGCAGGGCGAGGAAGG 36933 Query 148642 CGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCG 148701 | || ||||| ||||| || || | || | |||| |||| | | |||| | ||| | Sbjct 36934 CATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCTGTGTCTGAAGTTGCTGTTGCGAG 36993 Query 148702 CGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACC 148760 | || || | || ||||| ||| ||||| ||||||| ||||| || || ||| Sbjct 36994 CT-TCAGGAACCGGGTAGTGATTGACCTCGATAATCTTGTTCAGATTACGAGTGACGACC 37052 Query 148761 TTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCGGTTCACG 148820 | | | | | ||| | ||||| |||| | || || ||||| || ||| Sbjct 37053 TGGACGACTTCGTGGAGCTTCTGGAAATCATACTCGCCA----CGTTGCAT--GTCCACA 37106 Query 148821 ------------GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTAC 148868 || | ||||| | ||||| ||||| |||||| || ||| ||||| Sbjct 37107 TACGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTAC 37166 Query 148869 TCTACGATCTCGGCGCACAGATT---GCTGC-ATTTGATCACGCCCACGTTCTTTTGATT 148924 || | |||||||| ||| || || ||||| | | | || | | |||||| || || Sbjct 37167 TCAATGATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTC----CGAGGTTCTTCTGGTT 37222 Query 148925 GCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGT 148984 ||| |||| |||||| || |||||||| ||||| ||||| ||||| || ||| | Sbjct 37223 GCTTTTGCGGTTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGC 37282 Query 148985 TTCCACTATGAACCGATGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTA-GCGACCCTC 149041 || | ||| || ||| | ||| |||||||| || ||||| ||| ||||| Sbjct 37283 CTCGAGGATGG--CGTACCAGAGCTTCTGGGCGCGCACAGTCT-CTCGTCCGCGTCCCTC 37339 Query 149042 CTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGG 149101 ||| || ||||||| ||||||| | ||||| ||| ||| | | || || Sbjct 37340 GGCCTCATACTTGTGATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGG 37399 Query 149102 GCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAG 149161 | | || |||||| | || | |||| | || | | | || |||||||| || || Sbjct 37400 GGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAG 37459 Query 149162 ATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTT 149221 || || | ||| || ||||| | | || || || | ||||| ||| ||| Sbjct 37460 GTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTTGCCATGGTT 37519 Query 149222 GCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAG 149281 ||| || | || | || || | || |||||||| ||||| | ||| | |||| Sbjct 37520 CTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 37579 Query 149282 CGCGCCCTTGCGCTT---GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCG 149338 || || |||||| ||| ||||||||||| | || | |||||||| | || || Sbjct 37580 AGCACCTGGGCGCTTATTGCCACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACG 37639 Query 149339 AACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGC 149398 || |||||| | ||| ||| || ||||| || | ||| |||| || Sbjct 37640 AAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGC 37699 Query 149399 TCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GT 149457 || | || || |||| || || ||||| || ||| ||||| ||||| || Sbjct 37700 ACGGATGCGATGAACATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCACGT 37759 Query 149458 CGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACG 149517 | | ||||| ||||||||| ||||||||||| ||| || | || ||||| | Sbjct 37760 CTTC-AGCGTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGG 37818 Query 149518 AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAAT 149577 || |||| || || | || ||||| ||| | || || |||||||| || | Sbjct 37819 AGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGT 37878 Query 149578 ATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGC 149637 |||| | | ||| | ||| | ||||| | || ||||| ||||| ||||||| Sbjct 37879 ATTTGTTGGACATGTAGTTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGC 37938 Query 149638 CTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCA-CTT--TGTTTCCAATTT 149694 | | ||| || ||||| ||||| || || || ||||| || | ||| |||| || Sbjct 37939 CAACGGCTACACGCATGAGCATGTGTTGTGGACGCTCAGCAATCTTGCCGTTT---ATGC 37995 Query 149695 TGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752 ||| | || | ||| || ||||| |||||||| ||| ||||| |||||||| Sbjct 37996 GGAGGAGATATGAGCGTTCCAGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCGCG 38053 >seq46 Length=404262 Score = 163 bits (180), Expect = 3e-35 Identities = 343/502 (68%), Gaps = 11/502 (2%) Strand=Plus/Minus Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410 || ||| || ||||| | ||||| || |||||||| || || ||| ||| ||||| | Sbjct 338082 CTGGTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTC 338023 Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470 ||| || ||||| |||||| | ||||| || | || | | ||| | | |||||| Sbjct 338022 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGAGAGCCAAGAGCAG 337963 Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530 ||||| || || ||||| ||||||| ||||||| || | ||||||||| || | || Sbjct 337962 GCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAGAGC 337903 Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590 ||| | || |||| ||||| | ||| ||| || || || ||| ||||| Sbjct 337902 ACACGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGATGGC 337843 Query 120591 ---GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647 || | | | | || | | | |||||| || | | | | |||| ||||||| Sbjct 337842 CTCGA-CTTCCTTTTGCGACGGA-CGTGTGTT-GAGGAGAGAGAAG-AGTA--GGCACGC 337789 Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707 ||||| ||||||| ||||||||| || ||||| || |||||| || || |||||||| Sbjct 337788 GAAGTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGGG 337729 Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767 ||||| ||| | |||| | |||| |||| || ||| || || ||||| | ||| Sbjct 337728 CATGAGGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGATGCC 337669 Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-CTGTCGATCC 120826 || ||| ||| ||||| || | ||| | || || |||| | ||| ||| ||||| Sbjct 337668 TTCTACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGGTCGAGTTTTTGTCTG-AGATCC 337610 Query 120827 ACTTCATGGCCCACTCGGCCTT 120848 || | ||||| |||||||| Sbjct 337609 ACCGGAGAGCCCAGTCGGCCTT 337588 >seq412 Length=249799 Score = 127 bits (140), Expect = 2e-24 Identities = 156/208 (75%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||||||||| || ||||| ||| || ||| | | | || || || Sbjct 4321 AAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCAAG 4379 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| ||| | ||||| |||||||| || || || ||||| ||||| || ||| Sbjct 4380 CTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATC-CTGAA 4438 Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||||| |||| | || | || |||| | |||||| |||| ||||| || |||| Sbjct 4439 TTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATAGTCTTGC 4498 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||||| || || ||||| |||||||| Sbjct 4499 CGGTCAGGGTCTTGACGAAGATCTGCAT 4526 Score = 118 bits (130), Expect = 1e-21 Identities = 132/174 (76%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| ||| || || | | | ||||||||||||||||| Sbjct 4841 GTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCA-TCCTCGAGCTGCTTGCC 4899 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | ||||| ||||| || |||||||||||||| || |||||| ||| Sbjct 4900 TGCGAAAATCAAGCGCTGTTGGTCAGGCGGGATGCCTTCCTTATCCTGGATCTTCGACTT 4959 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636 || | |||| |||||| | || |||||| || | ||||| ||| |||||||| Sbjct 4960 GACATTGTCAATCGTGTCCGAGGACTCCACCTCCAAGGTGATGGTCTTGCCGGT 5013 Score = 82.4 bits (90), Expect = 7e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 |||||||| ||||| || ||||| ||| || ||| | | | ||||||||||||||||| Sbjct 4558 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 4616 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576 ||| | || | ||||| ||||| || |||||||| ||||| || |||||| Sbjct 4617 GGCGAAGATCAATCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTT 4670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483416201459640