Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq634 232 6e-56
seq46 163 3e-35
seq412 127 2e-24
>seq634
Length=211807
Score = 232 bits (256), Expect = 6e-56
Identities = 1110/1738 (64%), Gaps = 65/1738 (4%)
Strand=Plus/Plus
Query 148052 CGACTGGCTCTGGTCAATGAACGCGCCACGGTCAGCGGCCATTTCAATGA--GT-CGCTT 148108
||||||| ||| || ||||| |||||||||||||||||||| | ||||| || ||||
Sbjct 36344 CGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATGATGGTACGCTG 36403
Query 148109 TATCTTCATCTCCCAGGCCGTCTTGTACAGCCGCTTGATATGATCGGGAATGCCGTCGAT 148168
|| ||||| | |||||||| ||| |||||| | |||||||||| ||
Sbjct 36404 GGAG---ATTTCCCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATGTTAGGAAT 36460
Query 148169 GCGCTGCACCGAGCCGCGGTGCGCAAAAATCTGATTGCGCATTTCGTCCGTGTATAGGTT 148228
| ||| | || || | | || | || | || ||| | ||| | | |||
Sbjct 36461 CCTCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGGCC 36520
Query 148229 GAGCTCGATCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCAC 148288
| || | || || | | || | | || || ||||| ||||||||||| | ||
Sbjct 36521 CATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCCGGCCAAAAC 36580
Query 148289 GCGCCGCAGATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTG 148348
|| || || | |||| ||| | ||||| || | || |||| ||| | ||| ||
Sbjct 36581 ACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGTAGCCAAGAATTTG 36640
Query 148349 CGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT 148408
| || | || || |||||| || || |||||||||||||| | ||| | | |
Sbjct 36641 GGATGTGGAGGCAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACCATGCTGTGC 36700
Query 148409 TAT-TTTGCGCTTCAGAGCCGCCCAGTCCCAGAG--CGGCGACGGTGTCACGTTCCACAT 148465
|| ||||| ||| ||||| ||||||||||||| ||| | || || | ||||||||
Sbjct 36701 GATCTTTGC-CTTGAGAGCATCCCAGTCCCAGAGGTCGGTG--GGCGTGATATTCCACAT 36757
Query 148466 GTCGTACTGCAGAATGCCGCGGCTAG-CGGGGCTGCCCTCGTACGAGCTGTACGGTCCGT 148524
|| || || || ||||| | || || | || ||||||||| | || || ||
Sbjct 36758 ATCATATTGAAGTATGCC-CTGCGAGACAGGAGAGCCCTCGTAAGTTTCATATGGACCAA 36816
Query 148525 GCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTT 148584
| || ||||| ||||| || ||| || ||| ||| || ||||| || |
Sbjct 36817 GTTCCTTGGCCAGATCGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCTCAAAGATCT 36876
Query 148585 GCCTGTTGAGCAGCGCCGCCGACTCGCTT---TCGTACGGCATACGCAGCCGCACAAACG 148641
| |||||||| | || ||| ||| | |||| ||||| | || |
Sbjct 36877 GGGTGTTGAGCTTCCTTGCT---TCGGGAGAGTCGAAGGGCAGGCGCAGGGCGAGGAAGG 36933
Query 148642 CGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCG 148701
| || ||||| ||||| || || | || | |||| |||| | | |||| | ||| |
Sbjct 36934 CATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCTGTGTCTGAAGTTGCTGTTGCGAG 36993
Query 148702 CGCTCTCGAGC-GGATAGTGGTTGCGGTCGATGATCTTGTCAAGATTGCGCACCACCACC 148760
| || || | || ||||| ||| ||||| ||||||| ||||| || || |||
Sbjct 36994 CT-TCAGGAACCGGGTAGTGATTGACCTCGATAATCTTGTTCAGATTACGAGTGACGACC 37052
Query 148761 TTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTACGATGCATCGGTTCACG 148820
| | | | | ||| | ||||| |||| | || || ||||| || |||
Sbjct 37053 TGGACGACTTCGTGGAGCTTCTGGAAATCATACTCGCCA----CGTTGCAT--GTCCACA 37106
Query 148821 ------------GCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTAC 148868
|| | ||||| | ||||| ||||| |||||| || ||| |||||
Sbjct 37107 TACGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTAC 37166
Query 148869 TCTACGATCTCGGCGCACAGATT---GCTGC-ATTTGATCACGCCCACGTTCTTTTGATT 148924
|| | |||||||| ||| || || ||||| | | | || | | |||||| || ||
Sbjct 37167 TCAATGATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTC----CGAGGTTCTTCTGGTT 37222
Query 148925 GCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGT 148984
||| |||| |||||| || |||||||| ||||| ||||| ||||| || ||| |
Sbjct 37223 GCTTTTGCGGTTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGC 37282
Query 148985 TTCCACTATGAACCGATGCAGGTC--CTGCGCGCGCACTTGCTGCTCGTA-GCGACCCTC 149041
|| | ||| || ||| | ||| |||||||| || ||||| ||| |||||
Sbjct 37283 CTCGAGGATGG--CGTACCAGAGCTTCTGGGCGCGCACAGTCT-CTCGTCCGCGTCCCTC 37339
Query 149042 CTGCTCGTATAAAGTATACAGCCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGG 149101
||| || ||||||| ||||||| | ||||| ||| ||| | | || ||
Sbjct 37340 GGCCTCATACTTGTGATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGG 37399
Query 149102 GCACTTGTGCGGGCACATGAGCGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAG 149161
| | || |||||| | || | |||| | || | | | || |||||||| || ||
Sbjct 37400 GGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAG 37459
Query 149162 ATCGGGCACCCAGAGCGCGTACATGAGGTCGCGCGCCTTGCAGTCTTCGGCGCCCATGTT 149221
|| || | ||| || ||||| | | || || || | ||||| ||| |||
Sbjct 37460 GTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTTGCCATGGTT 37519
Query 149222 GCGGCGCAGGTTGAGCACGCTGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAG 149281
||| || | || | || || | || |||||||| ||||| | ||| | ||||
Sbjct 37520 CTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 37579
Query 149282 CGCGCCCTTGCGCTT---GCCGCCCTGGTCGACGTGGCGCACCATGTTGTTAAACACTCG 149338
|| || |||||| ||| ||||||||||| | || | |||||||| | || ||
Sbjct 37580 AGCACCTGGGCGCTTATTGCCACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACG 37639
Query 149339 AACCATAGGTTCAATGCCACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGC 149398
|| |||||| | ||| ||| || ||||| || | ||| |||| ||
Sbjct 37640 AAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGC 37699
Query 149399 TCGCACTTTGTGCACGTTGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCA-GT 149457
|| | || || |||| || || ||||| || ||| ||||| ||||| ||
Sbjct 37700 ACGGATGCGATGAACATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCACGT 37759
Query 149458 CGCCGAGCGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACG 149517
| | ||||| ||||||||| ||||||||||| ||| || | || ||||| |
Sbjct 37760 CTTC-AGCGTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGG 37818
Query 149518 AGCACATTTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAAT 149577
|| |||| || || | || ||||| ||| | || || |||||||| || |
Sbjct 37819 AGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGT 37878
Query 149578 ATTTCTGGCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGC 149637
|||| | | ||| | ||| | ||||| | || ||||| ||||| |||||||
Sbjct 37879 ATTTGTTGGACATGTAGTTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGC 37938
Query 149638 CTATGGCGACGCGCATCAGCATATGCTGCGGTCGCTCCGCCA-CTT--TGTTTCCAATTT 149694
| | ||| || ||||| ||||| || || || ||||| || | ||| |||| ||
Sbjct 37939 CAACGGCTACACGCATGAGCATGTGTTGTGGACGCTCAGCAATCTTGCCGTTT---ATGC 37995
Query 149695 TGAGCAAGTAGCCGTTTTCTAGTGTCTTGTAGCCAAAGTACTTGTAGTCAAAGTCGCG 149752
||| | || | ||| || ||||| |||||||| ||| ||||| ||||||||
Sbjct 37996 GGAGGAGATATGAGCGTTCCAGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCGCG 38053
>seq46
Length=404262
Score = 163 bits (180), Expect = 3e-35
Identities = 343/502 (68%), Gaps = 11/502 (2%)
Strand=Plus/Minus
Query 120351 CTTGTACTCGCCGACGCGTTTCTCAAAAAAGTTTGTTTTGCCCTCCATCGAAATGTTGTT 120410
|| ||| || ||||| | ||||| || |||||||| || || ||| ||| ||||| |
Sbjct 338082 CTGGTAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTC 338023
Query 120411 CATAAACTCGAACGGGTTGCTCGCGTTAAAGTATTTCGGCTGGCCCAACTGTACGAGCAG 120470
||| || ||||| |||||| | ||||| || | || | | ||| | | ||||||
Sbjct 338022 CATGAAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGAGAGCCAAGAGCAG 337963
Query 120471 TCGGTCCGCTACAAACTCAATGTACTCGCACATGGACTGCGCGTTCATGCCCAGCAACGC 120530
||||| || || ||||| ||||||| ||||||| || | ||||||||| || | ||
Sbjct 337962 GCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAGAGC 337903
Query 120531 CACCGGCAACGCCGACGTGAAAAACTCCTTCTCAATGTCCACCGCCTCCTTGAACATGGC 120590
||| | || |||| ||||| | ||| ||| || || || ||| |||||
Sbjct 337902 ACACGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGATGGC 337843
Query 120591 ---GAGCATAGTGTGGCCGGGCATCTTGTGTTCGATGCGCGTTCGGTAGTACAGGCACGC 120647
|| | | | | || | | | |||||| || | | | | |||| |||||||
Sbjct 337842 CTCGA-CTTCCTTTTGCGACGGA-CGTGTGTT-GAGGAGAGAGAAG-AGTA--GGCACGC 337789
Query 120648 AAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTCAGGCCGGG 120707
||||| ||||||| ||||||||| || ||||| || |||||| || || ||||||||
Sbjct 337788 GAAGTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGGG 337729
Query 120708 CATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAGAACACGCC 120767
||||| ||| | |||| | |||| |||| || ||| || || ||||| | |||
Sbjct 337728 CATGAGGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGATGCC 337669
Query 120768 CTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTG-CTGTCGATCC 120826
|| ||| ||| ||||| || | ||| | || || |||| | ||| ||| |||||
Sbjct 337668 TTCTACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGGTCGAGTTTTTGTCTG-AGATCC 337610
Query 120827 ACTTCATGGCCCACTCGGCCTT 120848
|| | ||||| ||||||||
Sbjct 337609 ACCGGAGAGCCCAGTCGGCCTT 337588
>seq412
Length=249799
Score = 127 bits (140), Expect = 2e-24
Identities = 156/208 (75%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||||||||||||||| || ||||| ||| || ||| | | | || || ||
Sbjct 4321 AAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCA-TCTTCAAG 4379
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||||||| ||| | ||||| |||||||| || || || ||||| ||||| || |||
Sbjct 4380 CTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATC-CTGAA 4438
Query 133574 CTTTTG-CTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||||| |||| | || | || |||| | |||||| |||| ||||| || ||||
Sbjct 4439 TTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATAGTCTTGC 4498
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
||||||| || || ||||| ||||||||
Sbjct 4499 CGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Score = 118 bits (130), Expect = 1e-21
Identities = 132/174 (76%), Gaps = 2/174 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||| ||||| || ||||| ||| || || | | | |||||||||||||||||
Sbjct 4841 GTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCA-TCCTCGAGCTGCTTGCC 4899
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | ||||| ||||| || |||||||||||||| || |||||| |||
Sbjct 4900 TGCGAAAATCAAGCGCTGTTGGTCAGGCGGGATGCCTTCCTTATCCTGGATCTTCGACTT 4959
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGT 133636
|| | |||| |||||| | || |||||| || | ||||| ||| ||||||||
Sbjct 4960 GACATTGTCAATCGTGTCCGAGGACTCCACCTCCAAGGTGATGGTCTTGCCGGT 5013
Score = 82.4 bits (90), Expect = 7e-11
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|||||||| ||||| || ||||| ||| || ||| | | | |||||||||||||||||
Sbjct 4558 GTGGACTCCTTCTGAATGTTGTAGTCGGACAGGGTGCGGCCA-TCCTCGAGCTGCTTGCC 4616
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTT 133576
||| | || | ||||| ||||| || |||||||| ||||| || ||||||
Sbjct 4617 GGCGAAGATCAATCGCTGTTGGTCTGGGGGGATGCCCTCCTTATCCTGGATCTT 4670
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483416201459640
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