Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq412 93.3 1e-13 >seq412 Length=249799 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||| || || |||||||| | || || || || ||| Sbjct 4295 CAGATCTTCGTCAAGACACTCACCGGCAAGACGATCACGCTAGAGGTTGAGTCGTCCGAC 4236 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| |||| || ||| ||||| || || ||||| || ||| |||||| ||| Sbjct 4235 ACAATCGACAACGTGAAGTCCAAGATCCAGGATAAAGAGGGTATTCCCCCGGACCAGCAA 4176 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || ||||| || || ||||||||||| || || | || | | || |||||| || Sbjct 4175 CGTCTCATCTTTGCTGGTAAGCAGTTGGAGGACGGCCGAACGCTCTCGGACTACAACATC 4116 Query 206353 CAGAAAGAGTCTACTCTTCAC 206373 ||||| ||||| ||||| ||| Sbjct 4115 CAGAAGGAGTCGACTCTGCAC 4095 Score = 93.3 bits (102), Expect = 1e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || || || || || || ||||| | || ||||| || || Sbjct 4523 CAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGAT 4464 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || |||| || ||| ||||| ||||| || || || || ||| ||||| || Sbjct 4463 ACCATCGACAACGTCAAATCAAAA-ATTCAGGATAAGGAGGGCATTCCCCCGGATCAGCA 4405 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | || ||||||||||| |||||| | |||||||| | || || |||| |||||| | Sbjct 4404 GCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACAT 4345 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 |||||||||||| || || ||| | ||| || | || ||| Sbjct 4344 CCAGAAAGAGTCCACCCTCCACTTGGTTCTGCGTCTGCGA 4305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181809276877881