Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq412 93.3 1e-13
>seq412
Length=249799
Score = 93.3 bits (102), Expect = 1e-13
Identities = 141/201 (70%), Gaps = 0/201 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || ||||| || || |||||||| | || || || || |||
Sbjct 4295 CAGATCTTCGTCAAGACACTCACCGGCAAGACGATCACGCTAGAGGTTGAGTCGTCCGAC 4236
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
||| |||| || ||| ||||| || || ||||| || ||| |||||| |||
Sbjct 4235 ACAATCGACAACGTGAAGTCCAAGATCCAGGATAAAGAGGGTATTCCCCCGGACCAGCAA 4176
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
| || ||||| || || ||||||||||| || || | || | | || |||||| ||
Sbjct 4175 CGTCTCATCTTTGCTGGTAAGCAGTTGGAGGACGGCCGAACGCTCTCGGACTACAACATC 4116
Query 206353 CAGAAAGAGTCTACTCTTCAC 206373
||||| ||||| ||||| |||
Sbjct 4115 CAGAAGGAGTCGACTCTGCAC 4095
Score = 93.3 bits (102), Expect = 1e-13
Identities = 154/220 (70%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || ||| || || || || || || ||||| | || ||||| || ||
Sbjct 4523 CAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGAT 4464
Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291
|| |||| || ||| ||||| ||||| || || || || ||| ||||| ||
Sbjct 4463 ACCATCGACAACGTCAAATCAAAA-ATTCAGGATAAGGAGGGCATTCCCCCGGATCAGCA 4405
Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351
| || ||||||||||| |||||| | |||||||| | || || |||| |||||| |
Sbjct 4404 GCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACAT 4345
Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
|||||||||||| || || ||| | ||| || | || |||
Sbjct 4344 CCAGAAAGAGTCCACCCTCCACTTGGTTCTGCGTCTGCGA 4305
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181809276877881
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |