Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq634 165 8e-36 seq412 132 5e-26 >seq634 Length=211807 Score = 165 bits (182), Expect = 8e-36 Identities = 617/953 (65%), Gaps = 21/953 (2%) Strand=Plus/Plus Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCAC 147525 || |||| ||||||||||| ||| |||| || |||||| | ||| |||| ||| Sbjct 37125 GAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAG 37184 Query 147526 AGGTT---GCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCG 147582 ||||| ||||| | | ||| | || | ||| |||||||| || ||||| || Sbjct 37185 AGGTTAGAGCTGCGAATAGT---TCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCA 37241 Query 147583 TCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGC 147642 || ||| ||||||| ||||| || |||||| || | || | ||| | || Sbjct 37242 TCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGG-CGTACCA 37300 Query 147643 -AGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAA 147701 || | ||| || ||||| || || ||| |||||| || ||| | |||| Sbjct 37301 GAGCTTCTGGGCGCGCACAGTCTCTCGTCCGCGTCCCTCGGCCTCATACTTGTGATACAG 37360 Query 147702 CCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAG 147761 | ||| ||||||||||| ||| ||||| | || || | | ||| || | || Sbjct 37361 CTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAG 37420 Query 147762 CGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTA 147821 | |||| | | | | || || ||| || || || || | |||||| ||||| Sbjct 37421 AGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTA 37480 Query 147822 CATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAA-ATTAAGCACGC 147880 | | ||| || || | || || ||| ||| | | | || || ||| | || Sbjct 37481 GAACAAATCACGGGCGCGGATCTCTTCCTTGCC-ATGGTTCTTGCGAAGATCAAGGAAGC 37539 Query 147881 TATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---C 147937 | ||| ||||||||||| || || | ||||| ||| | |||||| ||||| | Sbjct 37540 CAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGC 37599 Query 147938 CGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGC 147997 | ||||||||||||| || | |||||||| | || || | ||| || |||||| Sbjct 37600 CACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGT 37659 Query 147998 TCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCG-TGCACGTTA 148056 | | || ||||| || | ||| | |||| ||| || | | || || || || Sbjct 37660 TGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGA-TGCGATGAACATTG 37718 Query 148057 ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGA 148114 | ||||| ||||| || ||| || || |||||| || | || || ||||| Sbjct 37719 AGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCA--CGTCTTCAGCGTGTCGTAGA 37776 Query 148115 TGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCC 148174 |||| ||||||||||| | |||| | | | || || || |||| || || | Sbjct 37777 TGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGG 37836 Query 148175 GCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGC 148234 | ||||| || |||||| || ||| |||||| || || |||| | ||| | Sbjct 37837 GTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACATGTAGT 37896 Query 148235 GATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGA 148294 || ||||| || || | |||||||| |||||||| ||||| | || || ||||||| Sbjct 37897 TGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCATGA 37956 Query 148295 GCATGTGCTGTGGTCGTTCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTTTCG 148353 ||||||| ||||| || || |||| |||| ||| || ||| |||||| ||| Sbjct 37957 GCATGTGTTGTGGACGCTCAGCAATCTTG-CCGTTTATGCGGAGGAGATATGAGCGTTCC 38015 Query 148354 AGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 ||||| || | |||||| ||| ||| | || || | ||||| |||| || Sbjct 38016 AGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCGCGATCGTACACGATAGC 38068 >seq412 Length=249799 Score = 132 bits (146), Expect = 5e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962 |||| |||| |||||| || | | | |||||||| || |||||||||||| || ||| Sbjct 4306 CGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTG 4365 Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022 || |||||| ||||| || |||| |||| |||||||| ||||| || || ||||| Sbjct 4366 CGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCC 4425 Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082 || ||||| ||||||| ||| | | || | ||||||| || |||||| |||| Sbjct 4426 TCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGG 4485 Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || | || || || ||||| || || | ||| |||||||| Sbjct 4486 GTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476606666235960