Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq634 165 8e-36
seq412 132 5e-26
>seq634
Length=211807
Score = 165 bits (182), Expect = 8e-36
Identities = 617/953 (65%), Gaps = 21/953 (2%)
Strand=Plus/Plus
Query 147466 GACGCCAGATTGCAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCAC 147525
|| |||| ||||||||||| ||| |||| || |||||| | ||| |||| |||
Sbjct 37125 GAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAG 37184
Query 147526 AGGTT---GCTGCATTTTATGACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCG 147582
||||| ||||| | | ||| | || | ||| |||||||| || ||||| ||
Sbjct 37185 AGGTTAGAGCTGCGAATAGT---TCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCA 37241
Query 147583 TCTTTGAAGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGC 147642
|| ||| ||||||| ||||| || |||||| || | || | ||| | ||
Sbjct 37242 TCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGG-CGTACCA 37300
Query 147643 -AGGTCCTGCGCTCGCACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAA 147701
|| | ||| || ||||| || || ||| |||||| || ||| | ||||
Sbjct 37301 GAGCTTCTGGGCGCGCACAGTCTCTCGTCCGCGTCCCTCGGCCTCATACTTGTGATACAG 37360
Query 147702 CCGCTCAAACTCGTCGCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAG 147761
| ||| ||||||||||| ||| ||||| | || || | | ||| || | ||
Sbjct 37361 CTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAG 37420
Query 147762 CGACCACATGTCGTCCGCGTTAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTA 147821
| |||| | | | | || || ||| || || || || | |||||| |||||
Sbjct 37421 AGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTA 37480
Query 147822 CATAAGATCGCGCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAA-ATTAAGCACGC 147880
| | ||| || || | || || ||| ||| | | | || || ||| | ||
Sbjct 37481 GAACAAATCACGGGCGCGGATCTCTTCCTTGCC-ATGGTTCTTGCGAAGATCAAGGAAGC 37539
Query 147881 TATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---C 147937
| ||| ||||||||||| || || | ||||| ||| | |||||| ||||| |
Sbjct 37540 CAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGC 37599
Query 147938 CGCCCTGGTCGACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGC 147997
| ||||||||||||| || | |||||||| | || || | ||| || ||||||
Sbjct 37600 CACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGT 37659
Query 147998 TCGCAGTGCCGTTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCG-TGCACGTTA 148056
| | || ||||| || | ||| | |||| ||| || | | || || || ||
Sbjct 37660 TGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGA-TGCGATGAACATTG 37718
Query 148057 ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGA 148114
| ||||| ||||| || ||| || || |||||| || | || || |||||
Sbjct 37719 AGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCA--CGTCTTCAGCGTGTCGTAGA 37776
Query 148115 TGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCC 148174
|||| ||||||||||| | |||| | | | || || || |||| || || |
Sbjct 37777 TGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGG 37836
Query 148175 GCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGC 148234
| ||||| || |||||| || ||| |||||| || || |||| | ||| |
Sbjct 37837 GTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTTGTTGGACATGTAGT 37896
Query 148235 GATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGA 148294
|| ||||| || || | |||||||| |||||||| ||||| | || || |||||||
Sbjct 37897 TGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCATGA 37956
Query 148295 GCATGTGCTGTGGTCGTTCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTTTCG 148353
||||||| ||||| || || |||| |||| ||| || ||| |||||| |||
Sbjct 37957 GCATGTGTTGTGGACGCTCAGCAATCTTG-CCGTTTATGCGGAGGAGATATGAGCGTTCC 38015
Query 148354 AGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
||||| || | |||||| ||| ||| | || || | ||||| |||| ||
Sbjct 38016 AGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCGCGATCGTACACGATAGC 38068
>seq412
Length=249799
Score = 132 bits (146), Expect = 5e-26
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 131903 CGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTA 131962
|||| |||| |||||| || | | | |||||||| || |||||||||||| || |||
Sbjct 4306 CGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTG 4365
Query 131963 CGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCT 132022
|| |||||| ||||| || |||| |||| |||||||| ||||| || || |||||
Sbjct 4366 CGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCC 4425
Query 132023 TCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACC 132082
|| ||||| ||||||| ||| | | || | ||||||| || |||||| ||||
Sbjct 4426 TCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGG 4485
Query 132083 GTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | || || || ||||| || || | ||| ||||||||
Sbjct 4486 GTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476606666235960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |