Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq46 100 3e-16 >seq46 Length=404262 Score = 100 bits (110), Expect = 3e-16 Identities = 132/182 (73%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| | || | ||| |||||| |||||| ||| ||||| |||||||| ||||| Sbjct 337359 GCTCGACCAGGTTCTCGTTGACGATGCCGTCGGAGGCGGCGAAGAAGGCGAGGACGTGGG 337300 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||||| || || | |||||||| | ||||||||||| | | ||| ||||| | Sbjct 337299 AGATGAAGAAGCGCTCGTCGTCGTTCAATCGCTTGTTCCAGTCGTGGAGGTCTTTGGAGA 337240 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAAGAT 110891 |||||||||||| | |||| | | | | |||||||||||| ||||| |||| Sbjct 337239 GATCGATCTCTTCGGCGGTCCAAAAAGAGGCTTCGGCCTTCTTGTACATTTGCC--AGAT 337182 Query 110892 CT 110893 || Sbjct 337181 CT 337180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445090166039520