Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq412 98.7 9e-16 >seq412 Length=249799 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | || | ||| | ||| |||||| ||||||||||| |||| Sbjct 4526 TTCCACCACGGAGACGGAGGACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGG 4585 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 || ||| || | || || |||||||| || || || ||||| ||||| ||||| | | Sbjct 4586 ACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGG 4645 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCC 35686 | | || |||||| ||| |||| || | || |||| | | || ||||||||||| Sbjct 4646 GGATGCCCTCCTTATCCTGGATC-TTCGATTTGACGTTGTCGATGGTATCGCTCGATTCG 4704 Query 35687 ACCTCCACCGTGATCGTTTTACCCGT 35712 ||||| | || || || ||||| || Sbjct 4705 ACCTCAAGGGTAATGGTCTTACCGGT 4730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450789311825880