Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq412 136 4e-27 seq738 91.5 1e-13 seq634 87.8 2e-12 >seq412 Length=249799 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||| || |||| || | ||| || ||||| || || || |||||||||||| Sbjct 4300 CCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4359 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| || || || | |||||||||||| || || Sbjct 4360 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 4419 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || ||||||||| |||||| ||| | || |||||||| ||||| Sbjct 4420 ATGCCCTCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACC 4479 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714 ||||| || || || || ||||| | || || ||||| || |||||| Sbjct 4480 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 4527 Score = 127 bits (140), Expect = 2e-24 Identities = 151/205 (74%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544 |||| || | ||| || | ||||| || |||||||| ||||| ||||||||||||||| Sbjct 4526 TTCCACCACGGAGACGGAGGACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGG 4585 Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604 | |||| | || |||||||| ||||| || || ||||| ||||| || || || | Sbjct 4586 ACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGG 4645 Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664 | ||||| || || || || || || |||||| ||| | || ||| |||||| | Sbjct 4646 GGATGCCCTCCTTATCCTGGATCTTCGATTTGACGTTGTCGATGGTATCGCTCGATTCGA 4705 Query 134665 CGTCGAGAGTAATGGTTTTACCGGT 134689 | || || |||||||| |||||||| Sbjct 4706 CCTCAAGGGTAATGGTCTTACCGGT 4730 Score = 105 bits (116), Expect = 7e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||||| || || || || ||||| || |||||||||||| Sbjct 4811 CCACCGCGGAGACGAAGGACGAGATGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 4870 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | || |||||||| |||||||| |||||||| ||||| || || ||||| Sbjct 4871 AGAGTACGTCCATCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGTTGGTCAGGCGGG 4930 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || || || ||||| ||| | ||||| || || ||||| Sbjct 4931 ATGCCTTCCTTATCCTGGATCTTCGACTTGACATTGTCAATCGTGTCCGAGGACTCCACC 4990 Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689 || | || ||||| || ||||| Sbjct 4991 TCCAAGGTGATGGTCTTGCCGGT 5013 Score = 89.7 bits (98), Expect = 5e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || || || ||||| || ||||||||||| Sbjct 4072 CCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 4131 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | ||| || || ||||| || | ||| ||||| || || || Sbjct 4132 AGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGA 4191 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || || ||||| || || || || || || ||| | |||||||||||| || || Sbjct 4192 ATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACC 4251 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || || || ||||| | || || ||||| || ||||| Sbjct 4252 TCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298 >seq738 Length=174967 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| || | ||| | ||| || || || ||||| || |||||||||||| | Sbjct 25229 CCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 25288 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || |||||||| ||||| || || ||||||||||| || || || || Sbjct 25289 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGA 25348 Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629 ||||| || || || ||||| || Sbjct 25349 ATGCCCTCCTTGTCCTGAATCTT 25371 >seq634 Length=211807 Score = 87.8 bits (96), Expect = 2e-12 Identities = 530/845 (63%), Gaps = 27/845 (3%) Strand=Plus/Minus Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623 ||||||||||| |||| || || || ||||| |||||||||||||| || ||| | Sbjct 37966 CAACACATGCTCATGCGTGTAGCCGTTGGCATCCACGGCGAAGACATCGAGAAGGCCATC 37907 Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683 || || ||| | ||||| ||| | || || ||||| || || || | || | Sbjct 37906 GAGACATACAACTACATGTCCAACAAATACTTCACACACGCGTCTCCAACGCTTTTCAAC 37847 Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743 || || ||| | || || ||||||| || || | | || || |||||| Sbjct 37846 GCCGGAACACCCAACCCACAGATGTCCTCCTGCTTCCTCATCGATATCAAGGATGACAGC 37787 Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803 ||||| ||||| ||| |||||||| ||||| | || ||||| || ||||| Sbjct 37786 ATCGAAGGCATCTACGACACGCTGAAGACGTGCGCTATGATCTCCAAGACCGCTGGCGGT 37727 Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863 || ||||| || || | | | || |||| ||| ||||| || |||||| Sbjct 37726 ATTGGTCTCAATGTTCATCGCATCCGTGCCACCGGCTCATACATCGGTGGAACGAACGGA 37667 Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923 | ||| ||| | || ||| | || || | || ||| | | || |||| ||| Sbjct 37666 ACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACAACACCGCTCGTTATGTCGAC 37607 Query 7924 CAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980 ||||| || |||||| ||| || |||||||| | ||||| |||||||| || Sbjct 37606 CAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTCGAGCCATGGCACGCCGAT 37547 Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAA----CATGGGTTGCGAAGACAGCAAAGCGCG 8036 | | | | || |||| |||||| ||||| | ||||| | | || || Sbjct 37546 GTCTTTGGCTTCCTTGATCT---TCGCAAGAACCATGGCAAG-GAAGAGATCCGCGCCCG 37491 Query 8037 CGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGC 8096 ||| | |||| || ||||| | || || || || |||| ||| || || | | Sbjct 37490 TGATTTGTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGGGTCCAGGATAATGG 37431 Query 8097 ACAATGGTCGCTCATGTGCCCCGATCGTTG-CCCTTTATTAAAAAACGTTTACGGTTCAA 8155 | | ||| | || | || ||||| || | |||| || |||| || || Sbjct 37430 AGAGTGGACTCTTTTCTG-CCCGAACGAAGCCCCTGGGTTGGCCGACGTCTATGGCGACG 37372 Query 8156 AATTTGAACAATTGTACAAACAATACGAACACGACGG-CGCGTACGTGCGGCAAGTGAAA 8214 | || || | |||| | | || || ||| || |||| ||| || || Sbjct 37371 AGTTCGAGGAGCTGTATCACAAGTATGAGGCCGAGGGACGCGGACG-------AGAGACT 37319 Query 8215 GCGCGCGACCTGCACC------GCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCG 8268 | ||||| || | | | |||||| |||| || | ||| || || | ||| Sbjct 37318 GTGCGCGCCCAGAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGACTGGAAACCCG 37259 Query 8269 TACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATT 8328 || ||||| ||||| || || |||||| ||||||||| || | ||| | || || ||| Sbjct 37258 TATATGCTCTACAAGGATGCATGCAACCGCAAAAGCAACCAGAAGAACCTCGGAACTATT 37199 Query 8329 TGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTT 8388 | || || || ||| | || || | |||||| ||| ||||| || || ||||| Sbjct 37198 CGCAGCTCTAACCTCTGCACCGAGATCATTGAGTACACCGCACCCGATGAGGTTGCCGTC 37139 Query 8389 TGCAA 8393 ||||| Sbjct 37138 TGCAA 37134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505393592397720