Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq412 136 4e-27
seq738 91.5 1e-13
seq634 87.8 2e-12
>seq412
Length=249799
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| |||| || |||| || | ||| || ||||| || || || ||||||||||||
Sbjct 4300 CCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAC 4359
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| || || || | |||||||||||| || ||
Sbjct 4360 AGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGA 4419
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || ||||||||| |||||| ||| | || |||||||| |||||
Sbjct 4420 ATGCCCTCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACC 4479
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATT 134714
||||| || || || || ||||| | || || ||||| || ||||||
Sbjct 4480 TCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 4527
Score = 127 bits (140), Expect = 2e-24
Identities = 151/205 (74%), Gaps = 0/205 (0%)
Strand=Plus/Plus
Query 134485 TTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGC 134544
|||| || | ||| || | ||||| || |||||||| ||||| |||||||||||||||
Sbjct 4526 TTCCACCACGGAGACGGAGGACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGG 4585
Query 134545 CAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCG 134604
| |||| | || |||||||| ||||| || || ||||| ||||| || || || |
Sbjct 4586 ACAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGG 4645
Query 134605 GTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCA 134664
| ||||| || || || || || || |||||| ||| | || ||| |||||| |
Sbjct 4646 GGATGCCCTCCTTATCCTGGATCTTCGATTTGACGTTGTCGATGGTATCGCTCGATTCGA 4705
Query 134665 CGTCGAGAGTAATGGTTTTACCGGT 134689
| || || |||||||| ||||||||
Sbjct 4706 CCTCAAGGGTAATGGTCTTACCGGT 4730
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||||| || || || || ||||| || ||||||||||||
Sbjct 4811 CCACCGCGGAGACGAAGGACGAGATGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGAC 4870
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || |||||||| |||||||| |||||||| ||||| || || |||||
Sbjct 4871 AGAGTACGTCCATCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGTTGGTCAGGCGGG 4930
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || || || ||||| ||| | ||||| || || |||||
Sbjct 4931 ATGCCTTCCTTATCCTGGATCTTCGACTTGACATTGTCAATCGTGTCCGAGGACTCCACC 4990
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|| | || ||||| || |||||
Sbjct 4991 TCCAAGGTGATGGTCTTGCCGGT 5013
Score = 89.7 bits (98), Expect = 5e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || || || ||||| || |||||||||||
Sbjct 4072 CCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAG 4131
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | ||| || | ||| || || ||||| || | ||| ||||| || || ||
Sbjct 4132 AGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGA 4191
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || ||||| || || || || || || ||| | |||||||||||| || ||
Sbjct 4192 ATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACC 4251
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || || || || ||||| | || || ||||| || |||||
Sbjct 4252 TCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
>seq738
Length=174967
Score = 91.5 bits (100), Expect = 1e-13
Identities = 106/143 (74%), Gaps = 0/143 (0%)
Strand=Plus/Plus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | ||| | ||| || || || ||||| || |||||||||||| |
Sbjct 25229 CCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 25288
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || |||||||| ||||| || || ||||||||||| || || || ||
Sbjct 25289 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGA 25348
Query 134607 ATGCCTTCTTTTTCTTGAATTTT 134629
||||| || || || ||||| ||
Sbjct 25349 ATGCCCTCCTTGTCCTGAATCTT 25371
>seq634
Length=211807
Score = 87.8 bits (96), Expect = 2e-12
Identities = 530/845 (63%), Gaps = 27/845 (3%)
Strand=Plus/Minus
Query 7564 CAACACATGCTGTTGCGCGTGGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTG 7623
||||||||||| |||| || || || ||||| |||||||||||||| || ||| |
Sbjct 37966 CAACACATGCTCATGCGTGTAGCCGTTGGCATCCACGGCGAAGACATCGAGAAGGCCATC 37907
Query 7624 GAAACGTACCAAATGATGTCTTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCC 7683
|| || ||| | ||||| ||| | || || ||||| || || || | || |
Sbjct 37906 GAGACATACAACTACATGTCCAACAAATACTTCACACACGCGTCTCCAACGCTTTTCAAC 37847
Query 7684 GCGGGCACAAACGCGCCTCAATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGC 7743
|| || ||| | || || ||||||| || || | | || || ||||||
Sbjct 37846 GCCGGAACACCCAACCCACAGATGTCCTCCTGCTTCCTCATCGATATCAAGGATGACAGC 37787
Query 7744 ATCGACGGCATTTACAACACGCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGA 7803
||||| ||||| ||| |||||||| ||||| | || ||||| || |||||
Sbjct 37786 ATCGAAGGCATCTACGACACGCTGAAGACGTGCGCTATGATCTCCAAGACCGCTGGCGGT 37727
Query 7804 ATAGGTCTGAACGTAAACGACGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGA 7863
|| ||||| || || | | | || |||| ||| ||||| || ||||||
Sbjct 37726 ATTGGTCTCAATGTTCATCGCATCCGTGCCACCGGCTCATACATCGGTGGAACGAACGGA 37667
Query 7864 AAAGCCAGCGGTTTAGAGCCCATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGAC 7923
| ||| ||| | || ||| | || || | || ||| | | || |||| |||
Sbjct 37666 ACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACAACACCGCTCGTTATGTCGAC 37607
Query 7924 CAGGGGGG---AAAGCGCAAAGGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGAC 7980
||||| || |||||| ||| || |||||||| | ||||| |||||||| ||
Sbjct 37606 CAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTCGAGCCATGGCACGCCGAT 37547
Query 7981 ATTTACGCAGTGCTAAATCTGCGTCGCAA----CATGGGTTGCGAAGACAGCAAAGCGCG 8036
| | | | || |||| |||||| ||||| | ||||| | | || ||
Sbjct 37546 GTCTTTGGCTTCCTTGATCT---TCGCAAGAACCATGGCAAG-GAAGAGATCCGCGCCCG 37491
Query 8037 CGATCTATTCTTCGGATTGTGGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGC 8096
||| | |||| || ||||| | || || || || |||| ||| || || | |
Sbjct 37490 TGATTTGTTCTACGCTCTGTGGATTCCTGACCTCTTCATGAAGCGGGTCCAGGATAATGG 37431
Query 8097 ACAATGGTCGCTCATGTGCCCCGATCGTTG-CCCTTTATTAAAAAACGTTTACGGTTCAA 8155
| | ||| | || | || ||||| || | |||| || |||| || ||
Sbjct 37430 AGAGTGGACTCTTTTCTG-CCCGAACGAAGCCCCTGGGTTGGCCGACGTCTATGGCGACG 37372
Query 8156 AATTTGAACAATTGTACAAACAATACGAACACGACGG-CGCGTACGTGCGGCAAGTGAAA 8214
| || || | |||| | | || || ||| || |||| ||| || ||
Sbjct 37371 AGTTCGAGGAGCTGTATCACAAGTATGAGGCCGAGGGACGCGGACG-------AGAGACT 37319
Query 8215 GCGCGCGACCTGCACC------GCGCCATTATCGAATGTCAAAACGAAACCGGTATGCCG 8268
| ||||| || | | | |||||| |||| || | ||| || || | |||
Sbjct 37318 GTGCGCGCCCAGAAGCTCTGGTACGCCATCCTCGAGGCCCAGACCGAGACTGGAAACCCG 37259
Query 8269 TACATGCTGTACAAAGACGCTTGCAACGCCAAAAGCAATCAAAGCAACGTGGGCACCATT 8328
|| ||||| ||||| || || |||||| ||||||||| || | ||| | || || |||
Sbjct 37258 TATATGCTCTACAAGGATGCATGCAACCGCAAAAGCAACCAGAAGAACCTCGGAACTATT 37199
Query 8329 TGTTGCAGCAATCTGTGCGCTGAAATTGTACAGTACAGCGCGCCCGACGAAGTGGCCGTT 8388
| || || || ||| | || || | |||||| ||| ||||| || || |||||
Sbjct 37198 CGCAGCTCTAACCTCTGCACCGAGATCATTGAGTACACCGCACCCGATGAGGTTGCCGTC 37139
Query 8389 TGCAA 8393
|||||
Sbjct 37138 TGCAA 37134
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505393592397720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |