Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq634 87.8 6e-12
seq46 86.0 2e-11
>seq634
Length=211807
Score = 87.8 bits (96), Expect = 6e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 254954 ACGAACGGACGGAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGC 255013
||||||||| | | |||| | || || ||| | ||||| | |||||| |||||
Sbjct 37675 ACGAACGGAACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACAACACCGCTCGT 37616
Query 255014 TACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGG 255073
|| ||||| || || ||| || |||||||| || ||| |||||||||| ||||| |||
Sbjct 37615 TATGTCGACCAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTCGAGCCATGG 37556
Query 255074 CACGCCGA 255081
||||||||
Sbjct 37555 CACGCCGA 37548
>seq46
Length=404262
Score = 86.0 bits (94), Expect = 2e-11
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Plus
Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817
|| || ||||||||||||||||| ||||| || || |||| ||| || ||||| |||
Sbjct 337690 TTCGCGTCCATCTTCTGGTTGAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAAC 337749
Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869
||||| || ||| |||||||| |||| ||||||||| || || ||||
Sbjct 337750 GAACTCATATCTCGTGACGAGGGCATGCACACCGACTTCGCGTGCCTACTCT 337801
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588320513227645
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |