Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq634 87.8 6e-12 seq46 86.0 2e-11 >seq634 Length=211807 Score = 87.8 bits (96), Expect = 6e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 254954 ACGAACGGACGGAGCGGCGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGC 255013 ||||||||| | | |||| | || || ||| | ||||| | |||||| ||||| Sbjct 37675 ACGAACGGAACGTCCAACGGCCTCATCCCTATGCTTCGTGTCTATAACAACACCGCTCGT 37616 Query 255014 TACGTCGATCAAGGGGGCGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGG 255073 || ||||| || || ||| || |||||||| || ||| |||||||||| ||||| ||| Sbjct 37615 TATGTCGACCAGGGTGGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTCGAGCCATGG 37556 Query 255074 CACGCCGA 255081 |||||||| Sbjct 37555 CACGCCGA 37548 >seq46 Length=404262 Score = 86.0 bits (94), Expect = 2e-11 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 443758 TTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAAC 443817 || || ||||||||||||||||| ||||| || || |||| ||| || ||||| ||| Sbjct 337690 TTCGCGTCCATCTTCTGGTTGAAGAAGCGCGGCCTCATGCCCGGCCTCACCTTCTCCAAC 337749 Query 443818 GAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 ||||| || ||| |||||||| |||| ||||||||| || || |||| Sbjct 337750 GAACTCATATCTCGTGACGAGGGCATGCACACCGACTTCGCGTGCCTACTCT 337801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588320513227645