Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq634 264 1e-65
seq46 89.7 6e-13
>seq634
Length=211807
Score = 264 bits (292), Expect = 1e-65
Identities = 913/1396 (65%), Gaps = 35/1396 (3%)
Strand=Plus/Plus
Query 110707 GTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGG 110765
||||||||| | || |||||||| ||||||||||| | | |||||| |||| | ||||
Sbjct 36590 GTAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGT-AGCCAAGAATTTGGGATGTGG 36648
Query 110766 AGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTT 110825
|||| || ||||| || || | | || ||| |||| ||| | || ||| |
Sbjct 36649 AGGCAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACCATGCTGTGCGATCTTTG 36708
Query 110826 CCTTGAGAACATCCCAGTCGTAGTTGA-GCTTGGTTTCACCTTCCCACATGTCAAACTGA 110884
|||||||| |||||||||| || | | | || | | |||| |||| ||| | |||
Sbjct 36709 CCTTGAGAGCATCCCAGTCCCAGAGGTCGGTGGGCGTGATATTCC-ACATATCATATTGA 36767
Query 110885 AGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCC 110944
|| | || || || | ||||| ||||| | |||||||| | ||| | | | |||
Sbjct 36768 AGTATGCCCTGCGAGACAGGAGAGCCCTCGTAAGTTTCATATGGACCAAGTTCCTTGGCC 36827
Query 110945 AATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATC 111004
| || || || || | ||||| || ||||| |||||||| | | || | |
Sbjct 36828 AGATCGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGC 36887
Query 111005 TCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACC 111063
| | | ||||| || || || | | || ||| | || ||||||| |||||
Sbjct 36888 TTCCTTGCTTCGGGAGAGTCGAAGG-GCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACC 36946
Query 111064 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCA---AC 111120
|| || || | ||| | ||| ||||||| | || || | ||| || ||| ||
Sbjct 36947 CTGGACTCCAAGACCGACAGGCCTGTGTCTGAAGTTG--CTGTTGCG-AGCTTCAGGAAC 37003
Query 111121 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 111180
|| || ||| || || | ||| ||||| || || | || || |||
Sbjct 37004 CGGGTAGTGATTGACCTCGATAATCTTGTTCAGATTACGAGTGACGACCTGGACGACTTC 37063
Query 111181 ATGAAGTTTTTCATAATCAAAAGTGCGA-GTCTCTTCATTGACATACTTTGGAAGGGCGA 111239
|| || || | ||||| | || | || | | | |||||| || || || |
Sbjct 37064 GTGGAGCTTCTGGAAATCATACTCGCCACGTTGCATG-TCCACATACGCAGGGAGTGCAA 37122
Query 111240 TTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTAC 111299
|| ||||| ||||| || || |||||| | |||||||| | || || || |
Sbjct 37123 GCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGC 37182
Query 111300 ATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCAT 111359
| | ||| || || ||| || || | ||||| ||||| || || |||||| ||||
Sbjct 37183 AGAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTTGCTTTTGCGGTTGCATGCAT 37242
Query 111360 CCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-A 111418
||||||||||||| || || | || ||||| ||||| | | ||| || || | ||| |
Sbjct 37243 CCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGA 37302
Query 111419 ACATCGGCGGCTGGTACAATGGCGTTGGCC-CGTCCCTCCGCCTCGTACTTTGTG-TAGA 111476
| || | ||| | ||| | | | | || |||||||| ||||| ||| ||||| || |
Sbjct 37303 GCTTCTG-GGCGCGCACAGTCTC-TCGTCCGCGTCCCTCGGCCTCATAC-TTGTGATACA 37359
Query 111477 GGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAA 111536
| | || ||||| || || |||||| | || || || | || || |||||||
Sbjct 37360 GCTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAA 37419
Query 111537 GAGACCATTGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATG 111596
||| ||| | ||| |||| |||||||||||||| ||||| ||||||||||| |
Sbjct 37420 GAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGT 37479
Query 111597 AAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACT 111656
| || | ||| | || |||||| | || ||||| || | ||||||||
Sbjct 37480 AGAACAAATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGC 37539
Query 111657 CCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC---- 111712
| | || ||| |||||||||||||| || |||| |||| || || | | |||
Sbjct 37540 CAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACC---TGGGCGCTTAT 37596
Query 111713 --CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATAC 111770
||| | || | ||||| || || ||| |||| | || |||||||| || || | |
Sbjct 37597 TGCCACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGC 37656
Query 111771 CATCTGATTGACCATTTG-TCCCCCGA-ATACGAGATTTATTGGCTCTCACATCATGGAT 111828
| | || || || | ||| |||| || ||| |||| | | ||| |
Sbjct 37657 CGTTGGACGTTCCGTTCGTTCCACCGATGTATGAG--CCGGTGGCACGGATGCGATGAAC 37714
Query 111829 GTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATA 111888
| | |||||||| ||||| ||| ||||| || ||| | | || || | ||
Sbjct 37715 ATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTA 37774
Query 111889 GATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT 111948
||| || | ||| ||| |||||| | |||| |||||||| ||||||||| || |
Sbjct 37775 GATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTT 37834
Query 111949 TGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCT 112007
||||| || || ||||| || ||||| | ||||| |||| || | | |||||| |
Sbjct 37835 GGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAA-GTATTTGTTGGACATGT 37893
Query 112008 TGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCA 112067
|| ||||||||| | | | || |||||||| ||||||||||| | || || ||||
Sbjct 37894 AGTTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCA 37953
Query 112068 TGAACATGTACTGTGG 112083
||| ||||| |||||
Sbjct 37954 TGAGCATGTGTTGTGG 37969
>seq46
Length=404262
Score = 89.7 bits (98), Expect = 6e-13
Identities = 301/460 (65%), Gaps = 24/460 (5%)
Strand=Plus/Minus
Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430
|| || ||||||| |||||| |||||||| ||||| || | || ||||| |||||
Sbjct 338078 TAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTCCATG 338019
Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAA-----TGGGTGGCACC--CCAACTTGTTTGAG 122483
||||| || || || | ||||| | | ||| || | |||| |||
Sbjct 338018 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTGCCGAGAGCCAA-------GAG 337966
Query 122484 GAGACGATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG 122543
|| || || | || |||| ||||||| | |||| || |||||||| |||| ||
Sbjct 337965 CAGGCGGTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAG 337906
Query 122544 GTTACATGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGAT 122603
||| || || || || || |||| ||| ||| || || || || | | |||
Sbjct 337905 AGCACACGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGAT 337846
Query 122604 GGCGTGGA--TAGTTTCGGTAGTGG-GTCTATTACGCAAAGTCTTGAAGAGCTC-CACGG 122659
||| | || | ||| | | | || | || | | || |||||| ||||
Sbjct 337845 GGCCTCGACTTCCTTTTGCGACGGACGTGTGTTGAGGAGAGA---GAAGAGTAGGCACG- 337790
Query 122660 CAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTG 122719
| || || ||| | ||||| || || || || ||||| || |||||| || || |
Sbjct 337789 CGAAGTCGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGG 337730
Query 122720 GCATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATA 122778
||||||| || |||||||||||||| | || | ||| ||| || ||||||||||||||
Sbjct 337729 GCATGAGGCCGCGCTTCTTCAACCAGAAGATGGACGC-GAAGGAACCGGAGAAGAAGATG 337671
Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818
|| || || || || |||| ||||| | || ||||
Sbjct 337670 CCTTCTACGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGG 337631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628026025845600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |