Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq634 269 3e-67 seq46 136 5e-27 >seq634 Length=211807 Score = 269 bits (298), Expect = 3e-67 Identities = 1123/1746 (64%), Gaps = 27/1746 (2%) Strand=Plus/Plus Query 117827 GGCCTTTGATCGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATG 117886 |||| ||| |||||||||||| | || |||||||| || ||||||| | | || Sbjct 36236 GGCCATTGTTCGGAGGTAGTAGAGGCCGGTCTTGAGACCAAGCTTCCATCCGGCGAAGTG 36295 Query 117887 CATTGAGGACAACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTG 117946 ||| || | | |||| | ||| || | |||| | ||| | ||||| || Sbjct 36296 CATCGATGTAATCTTGCCCATGGTAGGCTCCTTCATGTGAATGTTGAGCGACTGGGACTG 36355 Query 117947 ATCGATGAAGCGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTG---ATTTC 118003 |||||||||| || || || || ||||| | ||| | | | | || | ||||| Sbjct 36356 ATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATGA--TGGTACG-CTGGGAGATTTC 36412 Query 118004 CCACACAGTCCTGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGA 118063 |||||| ||| |||| || ||| || ||||| || || | || | |||||||| Sbjct 36413 CCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATGTTAGGAATCCTCTGGATGGA 36472 Query 118064 TCCACCCGCCTTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAG 118123 ||||| | || ||| | | |||||| | | ||||| || || || | | Sbjct 36473 ACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGACCACAGGCCCATGTCAACCAA 36532 Query 118124 ATCCTCCACGAGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATA 118183 ||||| || ||| ||||| || ||||| || || | || | || Sbjct 36533 ATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCCGGCCAAAACACGGCGGGAGTA 36592 Query 118184 GATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGG 118242 ||| |||| || ||||| || ||||| ||||||| | |||||| |||||| |||||||| Sbjct 36593 GATGTTGGAGGTATATGGTTCGAAGCATTCATTGT-AGCCAAGAATTTGGGATGTGGAGG 36651 Query 118243 CTGTGGGCATGGGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCT 118302 | || |||||||| || | || || ||| || | ||| | | || | ||| Sbjct 36652 CAGTAGGCATGGGGGCAACAAGCAGCGAGTTGCGAACACCATGCTGTGCGATCTTTGCCT 36711 Query 118303 TGAGAGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGA 118362 ||||||| |||||||| || | | | | | |||||||||| | || || | Sbjct 36712 TGAGAGCATCCCAGTCCCAGAGGTCGGTGGGCGTGATATTCCACATATCATATTGAAGTA 36771 Query 118363 TACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATT 118422 | || || || | || || ||||| | || |||||||| || ||| |||| | Sbjct 36772 TGCCCTGCGAGACAGGAGAGCCCTCGTAAGTTTCATATGGACCAAGTTCCTTGGCCAGAT 36831 Query 118423 CGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCAT-TGCC 118481 || | || ||| || ||||| || || || ||||| || | | || | | || Sbjct 36832 CGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCTCAAAGATCTGGGTGTTGAGCTTCC 36891 Query 118482 TTGGCCTCGTCGGAATCAAACGCGAGTCGGCACAAAATAAATACATCCGCGAGACCTTGG 118541 ||| | ||| || || || | || || | || ||||||| ||||| ||| Sbjct 36892 TTG-CTTCGGGAGAGTCGAAGGGCAGGCGCAGGGCGAGGAAGGCATCCGCAAGACCCTGG 36950 Query 118542 ACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCCACGGGATAA 118601 || || || || | || | ||||| | || || ||||| || || || Sbjct 36951 ACTCCAAGACCGACAGGCCTGTGTCTGAAGTTGCTGTTGCGAGCTTCAGGAACCGGGTAG 37010 Query 118602 AAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGC 118661 ||| ||||||| | | || ||||| ||||| |||| || ||| || ||| Sbjct 37011 TGATTGACCTCGATAATCTTGTTCAGATTACGAGTGACGACCTGGACGACTTCGTGGAGC 37070 Query 118662 TTTTCGTAATCAAAACTGCGA-GTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGC 118720 || | | ||||| | || | || | | | |||||| ||| || || | || || Sbjct 37071 TTCTGGAAATCATACTCGCCACGTTGCATG-TCCACATACGCAGGGAGTGCAAGCGAGGC 37129 Query 118721 CAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTT 118780 || || || || | |||||| | |||||||| || || || ||||| | ||| Sbjct 37130 CAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTCAATGATCTCGGTGCAGAGGTT 37189 Query 118781 TGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG-TTACACGCATCCTTGT 118839 || || ||| || || | |||||| || || | |||| | || || |||||||||| Sbjct 37190 AGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTT-GCTTTTGCGGTTGCATGCATCCTTGT 37248 Query 118840 AAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCG 118898 | ||||| || || | || ||||| || |||| || ||| || || | ||||| | || Sbjct 37249 AGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAGGATGGCGTACCAGAGCTTCT 37308 Query 118899 GCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTTTGTG-TAGAGGGCTTC 118957 | || ||||||| | | || ||||| |||| ||| ||||| || || | || Sbjct 37309 G-GGCGCGCACAGTCTCTCGTCCGCGTCCCTCGGCCTCATAC-TTGTGATACAGCTCCTC 37366 Query 118958 AAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCA 119017 ||||| || || | | || | | ||| || || | | |||||||| |||| ||| Sbjct 37367 GAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTCGTTCGGGCAGAAAAGAGTCCA 37426 Query 119018 TTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAG 119077 | ||| |||| |||||||||||||||||||| || ||||| || || |||| | Sbjct 37427 CTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGGAATCCACAGAGCGTAGAACAA 37486 Query 119078 ATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGAT 119137 ||| || ||| ||||| | || || || || | || | ||| | | || Sbjct 37487 ATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCGAAGATCAAGGAAGCCAAAGAC 37546 Query 119138 ATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTG 119194 ||| |||||||| || || ||||| | |||| | || || | ||| |||| Sbjct 37547 ATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACCTGGGCGCTTATTGCCACCCTG 37606 Query 119195 GTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTG 119254 || ||||| | || ||| |||| | ||||||||||| || |||| || | ||| Sbjct 37607 GTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCATAGGGATGAGGCCGTTGGACGT 37666 Query 119255 GCCATTTG-TCCCCCGA-ATACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCA 119312 || || | ||| |||| || ||| | |||| | || || | | | |||| Sbjct 37667 TCCGTTCGTTCCACCGATGTATGAGCC--GGTGGCACGGATGCGATGAACATTGAGACCA 37724 Query 119313 ATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCG 119372 ||||| || || ||| ||||| |||||| | | || || ||||||| || ||| Sbjct 37725 ATACCGCCAGCGGTCTTGGAGATCATAGCGCACGTCTTCAGCGTGTCGTAGATGCCTTCG 37784 Query 119373 ATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTGGGTGTACCA 119432 || |||| |||| | |||||||||||||| ||||| || || ||||||| || Sbjct 37785 ATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGACATCTGTGGGTTGGGTGTTCCG 37844 Query 119433 GCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGT 119491 |||||||| || ||||| | |||||| |||| || | | |||||| | || ||| || Sbjct 37845 GCGTTGAAAAGCGTTGGAGACGCGTGTGTGAA-GTATTTGTTGGACATGTAGTTGTATGT 37903 Query 119492 CTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTA 119551 ||| | | | |||||||| ||||| || || | | || ||||| | ||||| Sbjct 37904 CTCGATGGCCTTCTCGATGTCTTCGCCGTGGATGCCAACGGCTACACGCATGAGCATGTG 37963 Query 119552 TTGGGG 119557 ||| || Sbjct 37964 TTGTGG 37969 >seq46 Length=404262 Score = 136 bits (150), Expect = 5e-27 Identities = 307/453 (68%), Gaps = 10/453 (2%) Strand=Plus/Minus Query 129728 TAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCATA 129787 || || || |||| ||||||||||||||||||||| ||| ||| ||| |||||||| Sbjct 338078 TAATCACCGACCCTCTTCTCGAAGAAGTTTGTCTTACCGGCCAGCGAGATGTTCTCCATG 338019 Query 129788 AAATCAAATGGGTTCTTTGAGTTCCA-AATTGCTGGCACTCCAATCTGTTTGAGGAGACG 129846 || || || ||||| | | ||| | || | ||| || | ||| || || Sbjct 338018 AAGTCGAAGGGGTTGGTGGCGTTGTAGAACTTTTGGTTG-CCGAGAGCCAAGAGCAGGCG 337960 Query 129847 ATCCGAGACGTACTCAATGTACTCAGACATCTTCTCGGAGTTCATACCGATGAGGTTACA 129906 || | |||| |||| ||||||| |||| || ||||||||| |||| || ||| Sbjct 337959 GTCGGCGACGAACTCGATGTACTGGCACATGAGCTTGGAGTTCATGCCGAGAAGAGCACA 337900 Query 129907 TGGGAGCGCGTCCAAGATGAACCCCTTCTCAATGTCCACAGCTTCCCGCACGATGGCGT- 129965 || || || || || |||| | | ||| ||| |||||||| | |||||| | Sbjct 337899 CGGTAGAGCTTCTGTGAGGAACTCTTGCTCGATGGTGACAGCTTCGGTGATGATGGCCTC 337840 Query 129966 GAATGGTCTCCGTGCCAG--GTCTATTGCGCAAAGTCTTGAAGAGTTC-CACGGCAAACT 130022 || | | | | | | || | ||| | | || ||||||| |||| | || | Sbjct 337839 GACTTCCTTTTGCGACGGACGTGTGTTGAGGAGAGA---GAAGAGTAGGCACG-CGAAGT 337784 Query 130023 CCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGA 130082 | ||| | ||||||||||| || |||||||| || |||||| || || ||||||| Sbjct 337783 CGGTGTGCATGCCCTCGTCACGAGATATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATGA 337724 Query 130083 GACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCA 130142 | || ||||||||||||||||| || | || || || ||||||||||| || || | Sbjct 337723 GGCCGCGCTTCTTCAACCAGAAGATGGACGCGAAGGAACCGGAGAAGAAGATGCCTTCTA 337664 Query 130143 CACACGCGAACGCAAAGAGACGCTCAGCAAAGG 130175 | ||||| |||| ||| || | ||||||| Sbjct 337663 CGGCGGCGAAGGCAACGAGGCGGTTCGCAAAGG 337631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618429317135160