Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq412 143 8e-29 >seq412 Length=249799 Score = 143 bits (158), Expect = 8e-29 Identities = 171/232 (74%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | ||||| | || || || |||||||| || || || || || Sbjct 4296 CATACCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 4355 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || || ||||||||||| || || || || ||||| ||||| |||||||| || Sbjct 4356 GGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGG 4415 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||| || || |||||||||||||| | ||| || || || || | ||| || | || Sbjct 4416 GGGAATGCCCTCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTC 4475 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || | ||||| ||||| || || || || || ||||||||| Sbjct 4476 CACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 4527 Score = 125 bits (138), Expect = 2e-23 Identities = 168/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563 |||| ||| ||||| | | || || | || ||||| ||||| || || || || || Sbjct 4065 TTACTGACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTA 4124 Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623 || || | ||||| || || || | || || ||||||||||| ||||||||||| || Sbjct 4125 GTCCGAGAGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTC 4184 Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683 || ||||| || ||||||||||| || || | || || || || || | || || | Sbjct 4185 CGGGGGAATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGA 4244 Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || || || | ||||| ||||| ||||| || || || |||||||| Sbjct 4245 CTCAACCTCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515239625796083