Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq412 143 8e-29
>seq412
Length=249799
Score = 143 bits (158), Expect = 8e-29
Identities = 171/232 (74%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||||||||| || | | ||||| | || || || |||||||| || || || || ||
Sbjct 4296 CATACCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 4355
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || ||||||||||| || || || || ||||| ||||| |||||||| ||
Sbjct 4356 GGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGG 4415
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
||||| || || |||||||||||||| | ||| || || || || | ||| || | ||
Sbjct 4416 GGGAATGCCCTCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTC 4475
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738
|| || || || | ||||| ||||| || || || || || |||||||||
Sbjct 4476 CACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 4527
Score = 125 bits (138), Expect = 2e-23
Identities = 168/234 (72%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 140504 TTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATA 140563
|||| ||| ||||| | | || || | || ||||| ||||| || || || || ||
Sbjct 4065 TTACTGACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTA 4124
Query 140564 ATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATC 140623
|| || | ||||| || || || | || || ||||||||||| ||||||||||| ||
Sbjct 4125 GTCCGAGAGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTC 4184
Query 140624 AGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGG 140683
|| ||||| || ||||||||||| || || | || || || || || | || || |
Sbjct 4185 CGGGGGAATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGA 4244
Query 140684 TTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
||||| || || || | ||||| ||||| ||||| || || || ||||||||
Sbjct 4245 CTCAACCTCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515239625796083
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |