Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq634 286 4e-72
seq390 105 7e-18
seq46 87.8 2e-12
>seq634
Length=211807
Score = 286 bits (316), Expect = 4e-72
Identities = 524/757 (69%), Gaps = 12/757 (2%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || ||| | || |||||||| || ||| | | | | ||||| |||
Sbjct 37956 TCATGCGTGTAGCCGTTGGCATCCACGGCGAAGACATCGAGAAGGCCATCGAGACATACA 37897
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
||| ||| | | || ||||| || ||||| | ||||| || |||||||| || ||
Sbjct 37896 ACTACATGTCCAACAAATACTTCACACACGCGTCTCCAACGCTTTTCAACGCCGGAACAC 37837
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|||| |||||||| ||||||||| | | || ||||||||| ||||| ||||
Sbjct 37836 CCAACCCACAGATGTCCTCCTGCTTCCTCATCGATATCAAGGATGACAGCATCGAAGGCA 37777
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| ||||| ||| ||| || ||||||||| | || ||||| ||| ||
Sbjct 37776 TCTACGACACGCTGAAGACGTGCGCTATGATCTCCAAGACCGCTGGCGGTATTGGTCTCA 37717
Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGG--CGTCGCC 53488
| || || | || ||||||| | |||| || ||| || |||||||| |||| |
Sbjct 37716 A-TGTTC-ATCGCATCCGTGCCACCGGCTCATACATCGGTGGAACGAACGGAACGTC--C 37661
Query 53489 GATGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGT 53548
| || || | |||||||| || |||| |||||||| || || || ||| ||||||||
Sbjct 37660 AACGGCCTCATCCCTATGCTTCGTGTCTATAACAACACCGCTCGTTATGTCGACCAGGGT 37601
Query 53549 GGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATG 53608
|| |||||| || | |||||||||||||||||||| ||||||||||| | |
Sbjct 37600 GGCAATAAGCGCCCAGGTGCTTTCGCCATCTACCTCGAGCCATGGCACGCCGATGTCTTT 37541
Query 53609 GAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT- 53667
| || || || || || ||| || || | |||||||| ||| |||||| ||||
Sbjct 37540 GGCTTCCTTGATCTTCGCAAGAACCATGGCAAGGAAGAGATCCGCGCCCGTGATTTGTTC 37481
Query 53668 TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTA 53727
||| |||||||||||||| |||||||||||| | ||| || | | | ||||||
Sbjct 37480 TAC-GCTCTGTGGATTCCTGACCTCTTCATGAAGCGGGTCCAGGATAATGGAGAGTGGAC 37422
Query 53728 CCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGTCTACGGTGAGGAGTTTAACGA 53787
|| | ||||||||||| ||| || | | ||||| || || ||||| | ||
Sbjct 37421 TCTTTTCTGCCCGAACGAAGCCCCTGGGTTGGCCGACGTCTATGGCGACGAGTTCGAGGA 37362
Query 53788 GATGTATCGGACGTACGCAGTTCAGGGCCGC-TACAAGAAGAAGGTCAAGGCGCGTGAGG 53846
| |||||| | ||| | | |||| ||| || || ||| || || | ||
Sbjct 37361 GCTGTATCACAAGTATGAGGCCGAGGGACGCGGACGAG-AGACTGTGCGCGCCCAGAAGC 37303
Query 53847 TATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGG 53906
| ||| | || |||||| || |||| ||||| |||| ||||| ||| ||||||||
Sbjct 37302 TCTGGTACGCCATCCTCGAGGCCCAGACCGAGACTGGAAACCCGTATATGCTCTACAAGG 37243
Query 53907 ATTCGGTCAACGAGAAGAGCAACCAGAAGAACATCGG 53943
|| | |||| || ||||||||||||||| ||||
Sbjct 37242 ATGCATGCAACCGCAAAAGCAACCAGAAGAACCTCGG 37206
Score = 93.3 bits (102), Expect = 5e-14
Identities = 138/196 (70%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 55728 TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGATTGACATGAGTG 55787
|||||| | | ||| ||| |||||||| || | ||| | | ||| | ||| |
Sbjct 36438 TCAAGGCGCTATACAAGACCGTGTGGGAAATCTCCCAGCGTACCATCATTCAGATGGCCG 36379
Query 55788 CTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTTCATGGAGAATCCTT 55847
|||| ||||| || | |||||| ||||||||||| || ||||| |||| || | |||
Sbjct 36378 CTGACCGTGGCGCCTTCATCGATCAGTCCCAGTCGCTCAACATTCACATGAAGGAGCCTA 36319
Query 55848 CACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGGACTCAAGACGGGTA 55907
| ||| |||| | | ||||||||||| ||| |||||| || |||||||| ||
Sbjct 36318 CCATGGGCAAGATTACATCGATGCACTTCGCCGGATGGAAGCTTGGTCTCAAGACCGGCC 36259
Query 55908 TGTACTATCTGCGGAC 55923
| ||||| || || ||
Sbjct 36258 TCTACTACCTCCGAAC 36243
>seq390
Length=251960
Score = 105 bits (116), Expect = 7e-18
Identities = 302/459 (66%), Gaps = 4/459 (1%)
Strand=Plus/Plus
Query 151868 AGCTGAATCCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGG 151927
|||| | || ||||| || || || | ||| ||||| |||| ||| || | ||| |||
Sbjct 44888 AGCTCCAACCAGTACCAATACCTTCGGAACCATTGACGAGAACCATGGGAAGAATTGGGA 44947
Query 151928 CGTAAAACTCCGGCTCCACCT-GTTGACCGTCATCCATCACGTATTTCAAAACGGAATTG 151986
| || | ||| ||||| | || |||| || ||| | ||||||||| | | || |
Sbjct 44948 CATATATCTCGGGCTCAATCTTGTTG-CCATCAGACTCGCCGTATTTCAGGAGAGCATCG 45006
Query 151987 TCAGCCGGATCGAATATCCGTCGAGTCATAGGACTCAAACGCGTGAAGATGTATCGGGAG 152046
|| | | ||| |||| |||| | ||| ||| || ||| | || || | || |
Sbjct 45007 TCGTGTGCGTGGAAAATCCTGCGAGCAAAGGGAGACAACCGGGTGTAAATATACCTGGCG 45066
Query 152047 CTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGG 152106
||||| ||||| | |||||| ||| || | ||||| | ||| ||||| || |
Sbjct 45067 CTGGCAGCATCTTGACCACCTTGCAGACGTGAACCAAAGTTACCACTCGGCTCCAGACAG 45126
Query 152107 TTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTC 152166
|||| |||||| | || ||||| ||||| || | | || ||||| ||||||| | |
Sbjct 45127 TTGATGTTGTTCGAACCAACGAAGTTCTGGGCTAGACCAACGATCGTTCCCTGCATAGAC 45186
Query 152167 GCTTCACCGTGGTGATACGCCGTC-TGCTCCGCGATGTATCCCGCCAACTGCGCCACCTT 152225
| |||||| | || | ||| ||| | | | | | ||||| | | |||| ||
Sbjct 45187 GTTTCACCATACGCGTAGTCGGTCGTGC-CAGATACGGAACCCGCAAGATCAACCACTTT 45245
Query 152226 CATGTCCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTT 152285
| |||| || | | ||| ||||||||||| ||| | |||||||| || | ||
Sbjct 45246 GACGTCCTTCCTGATGTTTCGCTTGAGACAGGTGTAGAGAACCTTGCGTTGACCGGTCTT 45305
Query 152286 CAAACCGTCCACCACGTGAGGAATCGAACGCTTGATGTC 152324
||||| || | ||| ||| || || ||| | ||||
Sbjct 45306 GAAACCATCAATGACGGAAGGGATGGATCGCATATTGTC 45344
>seq46
Length=404262
Score = 87.8 bits (96), Expect = 2e-12
Identities = 95/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 74783 TATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGAT 74842
||| | ||| || || || | ||||| ||||| || || |||||||||||||| |||||
Sbjct 337758 TATGAGTTCGTTGGAGAAGGTGAGGCCGGGCATGAGGCCGCGCTTCTTCAACCAGAAGAT 337699
Query 74843 GGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTG 74902
|| ||||||||| ||||||||||||||| || || ||||| || ||||| |
Sbjct 337698 GGACGCGAAGGAACCGGAGAAGAAGATGCCTTCTACGGCGGCGAAGGCAACGAGGCGGTT 337639
Query 74903 CGCGAA 74908
||| ||
Sbjct 337638 CGCAAA 337633
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547210794607800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |