Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq738 98.7 6e-16
seq11 84.2 1e-11
>seq738
Length=174967
Score = 98.7 bits (108), Expect = 6e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
||||| | ||||| | |||||| || ||||| |||||| || ||||| || || |||
Sbjct 25229 CCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAA 25288
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
|| || || | || || || || || ||||| || || ||||||||||||||||| ||
Sbjct 25289 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGGA 25348
Query 34600 ACTCCCTCCTTGTC 34613
| |||||||||||
Sbjct 25349 ATGCCCTCCTTGTC 25362
>seq11
Length=137347
Score = 84.2 bits (92), Expect = 1e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 34515 CTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAA 34574
|||||| || ||||| || || || || || || ||||||| || || || ||||| ||
Sbjct 124749 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAA 124808
Query 34575 TATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGA 34618
|| | |||||||||||| || || | ||||||||||||||||
Sbjct 124809 GATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTGTGA 124852
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314726680981313
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |