Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq412 114 1e-20
>seq412
Length=249799
Score = 114 bits (126), Expect = 1e-20
Identities = 155/211 (73%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || ||| |||||| || || || || |||| || || || | || |||
Sbjct 4318 ACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCA 4377
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| || || || ||||||||||| || | ||| | || ||| || ||| ||
Sbjct 4378 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCC-TG 4436
Query 39196 ATTTTCTG-TTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTT 39253
| ||| || ||||| ||| | | | |||||| ||||||||| || | |||||| | |
Sbjct 4437 AATTTTTGATTTGA-CGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATAGTCT 4495
Query 39254 TTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| || ||||| || || || ||||| |||||
Sbjct 4496 TGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429541616098793
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |