Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq412 109 4e-19 >seq412 Length=249799 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 ||||||||| ||||| || ||||| || || || || ||||| ||||| || || || | Sbjct 4527 AATGCAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTC 4468 Query 23670 GGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || | || | | ||| ||||||| || || || || | || || ||||| Sbjct 4467 CGATACCATCGACAACGTCAAATCAAAAATTCAGGATAAGGAGGGCATTCCCCCGGATCA 4408 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||| || || ||||| | ||||| | ||| ||||| Sbjct 4407 GCAGCGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAA 4348 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 ||| || ||||||||||| | || || ||| | | ||||||| || Sbjct 4347 CATCCAGAAAGAGTCCACCCTCCACTTGGTTCTGCGTCTGCGAGGTGG 4300 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338006465066588