Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq412 122 2e-22 seq634 84.2 5e-11 >seq412 Length=249799 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| ||||| || || || |||| ||||| || | | |||| || || Sbjct 4087 AGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGGCCGTCC 4146 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| ||||| ||||| || ||||| ||||| || |||||||| || || || Sbjct 4147 TCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGAATACCCTCTTTATCC 4206 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||| ||||| || | || || |||| |||||||||| Sbjct 4207 TGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACCTCTAGCGTGATCGTC 4266 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| || | || || | ||| | ||||| Sbjct 4267 TTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298 >seq634 Length=211807 Score = 84.2 bits (92), Expect = 5e-11 Identities = 103/141 (73%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 193628 CTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGC 193687 ||| ||||| | ||||| ||||| || || | || |||| ||| | | || || || Sbjct 37343 CTCATACTTGTGATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGC 37402 Query 193688 TTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTC 193747 ||| || ||||| || ||| |||| ||||||| | | |||| ||||||||||||||| Sbjct 37403 TTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTC 37462 Query 193748 AGATGTCCAAATGGCGTAGAA 193768 || |||| | |||||||| Sbjct 37463 AGGAATCCACAGAGCGTAGAA 37483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192519572448134