Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_030230.1
Length=372707
Score E
Sequences producing significant alignments: (Bits) Value
seq412 122 2e-22
seq634 84.2 5e-11
>seq412
Length=249799
Score = 122 bits (134), Expect = 2e-22
Identities = 154/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561
|| || | ||| ||||| || || || |||| ||||| || | | |||| || ||
Sbjct 4087 AGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGGCCGTCC 4146
Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621
|| | |||||| ||||| ||||| || ||||| ||||| || |||||||| || || ||
Sbjct 4147 TCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGAATACCCTCTTTATCC 4206
Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681
|||||||| |||||| ||||| ||||| || | || || |||| ||||||||||
Sbjct 4207 TGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACCTCTAGCGTGATCGTC 4266
Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713
||||| || | || || | ||| | |||||
Sbjct 4267 TTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
>seq634
Length=211807
Score = 84.2 bits (92), Expect = 5e-11
Identities = 103/141 (73%), Gaps = 0/141 (0%)
Strand=Plus/Plus
Query 193628 CTCGTACTTTTCGTACAGTTCCTCAAAATCTTGTCCGTAGATTTCGTCGAGACCGGGAGC 193687
||| ||||| | ||||| ||||| || || | || |||| ||| | | || || ||
Sbjct 37343 CTCATACTTGTGATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGC 37402
Query 193688 TTCCTTTGGGCAAAAGAGACTCCAATCTCCATCACTTTCCACCCTCTTCATGAAGAGGTC 193747
||| || ||||| || ||| |||| ||||||| | | |||| |||||||||||||||
Sbjct 37403 TTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTC 37462
Query 193748 AGATGTCCAAATGGCGTAGAA 193768
|| |||| | ||||||||
Sbjct 37463 AGGAATCCACAGAGCGTAGAA 37483
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1192519572448134
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |