Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq634 183 4e-41 >seq634 Length=211807 Score = 183 bits (202), Expect = 4e-41 Identities = 1182/1877 (63%), Gaps = 39/1877 (2%) Strand=Plus/Plus Query 76782 GTAAACTGAATTGGAGAAGATGCGGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 76841 || || ||||| |||| ||| |||| |||| || || ||||| | || || || ||| Sbjct 36213 GTGAATTGAATAGGAGCAGAGGCGGCCATTGTTCGGAGGTAGTAGAGGCCGGTCTTGAGA 36272 Query 76842 CCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGTTTGGAATAACTAGGATCGGCTATA 76901 || || |||||||| ||| ||||| ||| | ||| |||| || || Sbjct 36273 CCAAGCTTCCATCCGGCGAAGTGCATCGATGTAATCTTGCCCATGGTAGGCTCCTTCATG 36332 Query 76902 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 76961 ||||| || | |||||| ||||||||||| || || | ||||| ||||| | || Sbjct 36333 TGAATGTTGAGCGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATG 36392 Query 76962 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGG 77021 ||||| || | |||||||| | || ||| | | ||||| ||||| |||| | Sbjct 36393 ATGGTACGCTGGGAGATTTCCCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATG 36452 Query 77022 TTTG---TATTTTGAATGGAACCACCATCTGATATAATTGTATTCTTTATATCATCATTC 77078 || | | | || |||||||||||||| | || || ||||| || | ||| | Sbjct 36453 TTAGGAATCCTCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGAC 36512 Query 77079 CACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGAGGATTAACTATTTGAAATTCTCCA 77138 |||| | | || ||| | | ||||| || || || | || || || || Sbjct 36513 CACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCCG 36572 Query 77139 GACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 77198 | ||| || | || | ||| || || |||||||||||| | ||||||||| || Sbjct 36573 GCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGTAGCCA 36632 Query 77199 AAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTA-TTTCTGAGACC 77257 | |||||| | || || ||||| ||||| || | || ||| | | | || | | ||| Sbjct 36633 AGAATTTGGGATGTGGAGGCAGTAGGCAT-GGGGGCAACAAGCAGCGAGTTGCGAACACC 36691 Query 77258 ATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACAT 77316 ||| ||| | ||| || | || ||| | ||| ||||| || || | || | || Sbjct 36692 ATGCTGTGC-GATCTTTGCCTTGAGAGCATCCCAGTCCCAGAGGTCGGTGGGCGTGATAT 36750 Query 77317 CCCAAAGATCGTATTGTAGAATTCCGTTACTAG-CATATGATCCATTATATGTTTCATAA 77375 ||| | ||| ||||| || || || | | || || || || | || |||||||| Sbjct 36751 TCCACATATCATATTGAAGTATGCC-CTGCGAGACAGGAGAGCCCTCGTAAGTTTCATAT 36809 Query 77376 GGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCG 77435 || || | | || || || ||| || | | || ||| || || || || Sbjct 36810 GGACCAAGTTCCTTGGCCAGATCGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCTCA 36869 Query 77436 AAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAACGGATAATGTAAAAGAATA 77495 || |||| | ||||| | |||||| | || || || | | | Sbjct 36870 AAGATCTGGGTGTTGAGCTTCCTTGCTTCGGGAGAGTCGAAGGGCAGGCGCAGGGCGAGG 36929 Query 77496 AAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATT 77555 |||||||| || | ||||| ||||||| ||| | ||| || ||||| ||| | Sbjct 36930 AAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCTGTGTCTGAAGTTGCTGTTG 36989 Query 77556 TTAGCTTCTGGAATAGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACT 77615 |||||| |||| || || | ||| | || ||||| || || ||||| | | || Sbjct 36990 CGAGCTTCAGGAACCGGGTAGTGATTGACCTCGATAATCTTGTTCAGATTACGAGTGACG 37049 Query 77616 ACTTTAACCACGTCCTTTAGTTTAAGAAAATCA-AATC------TTCCATCTATAACAAA 77668 || | || || || | || || | |||||| | || || ||| | ||| | Sbjct 37050 ACCTGGACGACTTCGTGGAGCTTCTGGAAATCATACTCGCCACGTTGCATGT-CCACATA 37108 Query 77669 CATGTTCAAAGCTATAGATGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTG 77728 | | || | || || | || || || || ||||||| | || || | Sbjct 37109 CGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTACTC 37168 Query 77729 TATTATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTT 77788 || |||||||| || || ||| | ||||| || || || | |||||||| || Sbjct 37169 AATGATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTTGCTTTT 37228 Query 77789 TTTATTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGAT 77848 ||||||| ||||| || || ||| |||| | || || || |||| | |||| Sbjct 37229 GCGGTTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTCGAG 37288 Query 77849 AATAGATTTCCAGACGACTCTAGCTTTTATCATAGATTTGTATCGCCTCTCTC--TTTCA 77906 || | | ||||| | ||| | || | || ||| || ||| ||| Sbjct 37289 GATGGCGTACCAGA-GCTTCTGGGCGCGCACAGTCTCTCGT-CCGCGTCCCTCGGCCTCA 37346 Query 77907 TA-TTGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTC 77965 || ||| | ||| ||| || || || || || | || || |||| |||||| ||| Sbjct 37347 TACTTGTG-ATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGGGGCTTC 37405 Query 77966 ATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGG 78025 || ||||| | | | ||| || |||| |||| || || ||||| ||||| ||||| Sbjct 37406 GTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAGGTCAGG 37465 Query 78026 TATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT 78085 ||||| ||||| || | ||| |||| | ||||| || || ||||| Sbjct 37466 AATCCACAGAGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTTGCCATGGTTCTTGCG 37525 Query 78086 AAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCC 78145 |||||| || || | | | ||| | |||||||| || || || || || | | | || Sbjct 37526 AAGATCAAGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAAAGCACC 37585 Query 78146 AGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACAT 78205 || || ||||| || ||||| || | ||| | |||||||| ||||| || | | ||| Sbjct 37586 TGGGCGCTTATTGCCACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACGAAGCAT 37645 Query 78206 TGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAAT 78265 || || | ||||| || ||||| || |||||| || || || | || || || Sbjct 37646 AGGGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGCACGGAT 37705 Query 78266 ATTACTA--ATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGT-TT 78322 | | || || | || || || || || |||| || || | ||||| |||| || Sbjct 37706 GCGATGAACATTGAGA--CCAATACCGCCAGCGGTCTTGGAGATCATAGCGC-ACGTCTT 37762 Query 78323 CAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGA 78382 || || |||||||| || || || ||||||||| | || | | || || ||| || Sbjct 37763 CAGCGTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGGAGGA 37822 Query 78383 CATTTGATGATGAACAGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTT 78442 ||| || | | ||||| || || || | || ||||| || || || || |||| Sbjct 37823 CATCTGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGTATTT 37882 Query 78443 TTCAGA-AAGTAGATTGTATGTTTCAATAGCTGATTCTATGTC----CCATTGATGAATT 78497 | || | |||| |||||||| || || || || ||||| || | |||| Sbjct 37883 GTTGGACATGTAG-TTGTATGTCTCGATGGCCTTCTCGATGTCTTCGCCGTGGATG---- 37937 Query 78498 CCTACCGCTACACGCATCAACATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTC 78557 || || ||||||||||| | ||| || || || | ||| | |||| ||||| Sbjct 37938 CCAACGGCTACACGCATGAGCATGTGTTGTGGACGCTCAGCAATCTTGCCGTTTATGCGG 37997 Query 78558 AACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCG 78617 | | ||||| ||||| || ||||| ||||| | | ||| ||||| | ||| Sbjct 37998 AGGAGATATGAGCGTTCCAGGGTCTTAAAGCCAAAGAACTGGTAGTTGAAGTCGCGATCG 38057 Query 78618 TAAATAATAACAGAATT 78634 || | ||| |||| || Sbjct 38058 TACACGATAGCAGAGTT 38074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694662191963040