Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq634 192 8e-44 >seq634 Length=211807 Score = 192 bits (212), Expect = 8e-44 Identities = 1162/1837 (63%), Gaps = 43/1837 (2%) Strand=Plus/Plus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||| ||||| |||| || || | |||| || || ||||| | || || || ||| Sbjct 36213 GTGAATTGAATAGGAGCAGAGGCGGCCATTGTTCGGAGGTAGTAGAGGCCGGTCTTGAGA 36272 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 || || |||||||| ||| ||||| ||| | ||| | || || || Sbjct 36273 CCAAGCTTCCATCCGGCGAAGTGCATCGATGTAATCTTGCCCATGGTAGGCTCCTTCATG 36332 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| || | |||||| ||||||||||| || || | ||||| ||||| | || Sbjct 36333 TGAATGTTGAGCGACTGGGACTGATCGATGAAGGCGCCACGGTCAGCGGCCATCTGAATG 36392 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 ||||| || | |||||||| | || ||| | | ||||| ||||| |||| Sbjct 36393 ATGGTACGCTGGGAGATTTCCCACACGGTCTTGTATAGCGCCTTGATTTCATCGGGAATG 36452 Query 75617 TTTGTATTT---TGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 || | | | || ||||| || ||||| | || || ||||| || | ||| | Sbjct 36453 TTAGGAATCCTCTGGATGGAACCACCATCGGCGATGATGCGGTTCTTCATGTTGTCAGAC 36512 Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733 |||| | || ||| | | ||||| || || || | || || || || Sbjct 36513 CACAGGCCCATGTCAACCAAATCCTTCAGGAGCCAGGGGTTGACGACCTGGAACTCGCCG 36572 Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793 | ||| || | || | ||| || || |||||||||||| | ||||||||| || Sbjct 36573 GCCAAAACACGGCGGGAGTAGATGTTGGAGGTATATGGTTCGAAGCATTCATTGTAGCCA 36632 Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTA-TTTCTGAGACC 75852 | |||||| | || || ||||| ||||| || | || ||| | | | || | | ||| Sbjct 36633 AGAATTTGGGATGTGGAGGCAGTAGGCAT-GGGGGCAACAAGCAGCGAGTTGCGAACACC 36691 Query 75853 ATG-TGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACAT 75911 ||| ||| | ||| || | || ||| | ||| ||||| || || | || | || Sbjct 36692 ATGCTGTGC-GATCTTTGCCTTGAGAGCATCCCAGTCCCAGAGGTCGGTGGGCGTGATAT 36750 Query 75912 CCCAGAGATCGTATTGTAGAATTCCGTTGCTAG-CATATGATCCATTATATGTTTCGTAA 75970 ||| | ||| ||||| || || || ||| || || || || | || ||||| || Sbjct 36751 TCCACATATCATATTGAAGTATGCC-CTGCGAGACAGGAGAGCCCTCGTAAGTTTCATAT 36809 Query 75971 GTCCC--GTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTT 76028 | || || | || || || |||||| || | ||| ||| || || || | Sbjct 36810 GGACCAAGTTCCTT--GGCCAGATCGCAAGACGATGTGAGAGCAGCGTGGTAGATGGTCT 36867 Query 76029 CGAAAATCTTCTTATTAAGAT--CTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAG 76086 | || |||| | || || | ||| ||||| || || || || | | Sbjct 36868 CAAAGATCTGGGTGTTGAGCTTCCTT--GCTTCGGGAGAGTCGAAGGGCAGGCGCAGGGC 36925 Query 76087 AATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGA 76146 | || ||||| || || ||||| ||||||| ||| | ||| || ||||| ||| Sbjct 36926 GAGGAAGGCATCCGCAAGACCCTGGACTCCAAGACCGACAGGCCTGTGTCTGAAGTTGCT 36985 Query 76147 AATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGAC 76206 | |||||| |||| ||||| | ||| | || ||||| || || ||||| | Sbjct 36986 GTTGCGAGCTTCAGGAACCGGGTAGTGATTGACCTCGATAATCTTGTTCAGATTACGAGT 37045 Query 76207 AACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCA---TCTAT---CAC 76260 || || | || || || | || || | |||||| | | ||| | || ||| Sbjct 37046 GACGACCTGGACGACTTCGTGGAGCTTCTGGAAATCATACTCGCCACGTTGCATGTCCAC 37105 Query 76261 AAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATA 76320 | || | || || | || || | || || ||||| ||||||| | || || Sbjct 37106 ATACGCAGGGAGTGCAAGCGAGGCCAAGTTGCAGACGGCAACCTCATCGGGTGCGGTGTA 37165 Query 76321 TTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCT 76380 | || ||||| ||||| || ||| | |||||||| || || | |||||||| Sbjct 37166 CTCAATGATCTCGGTGCAGAGGTTAGAGCTGCGAATAGTTCCGAGGTTCTTCTGGTTGCT 37225 Query 76381 CTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTC 76440 || ||| |||| ||||| || || | | |||| ||||||| || |||| | || Sbjct 37226 TTTGCGGTTGCATGCATCCTTGTAGAGCATATACGGGTTTCCAGTCTCGGTCTGGGCCTC 37285 Query 76441 GATAATAGATTTCCAGACGACTCT---AGCTTTTATTATAGATTTGTATCGCTTCTCTC- 76496 || || | | ||||| | ||| || | | | | || ||| || ||| Sbjct 37286 GAGGATGGCGTACCAGA-GCTTCTGGGCGCGCACAGTCT---CTCGT-CCGCGTCCCTCG 37340 Query 76497 -TTTCATA-TTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGG 76554 ||||| ||||| ||| | | || || || || || | || || |||| ||||| Sbjct 37341 GCCTCATACTTGTG-ATACAGCTCCTCGAACTCGTCGCCATAGACGTCGGCCAACCCAGG 37399 Query 76555 ACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAG 76614 ||| ||||| || | | | |||||| |||| |||| ||||| ||||| ||||| Sbjct 37400 GGCTTCGTTCGGGCAGAAAAGAGTCCACTCTCCATTATCCTGGACCCGCTTCATGAAGAG 37459 Query 76615 ATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATT 76674 ||||| ||||| ||||| || | ||| |||| | ||||| || || || Sbjct 37460 GTCAGGAATCCACAGAGCGTAGAACAAATCACGGGCGCGGATCTCTTCCTTGCCATGGTT 37519 Query 76675 CTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCAT 76734 ||| |||||| ||||| | | | ||| | |||||||| || || || || || | Sbjct 37520 CTTGCGAAGATCAAGGAAGCCAAAGACATCGGCGTGCCATGGCTCGAGGTAGATGGCGAA 37579 Query 76735 AACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCT 76794 | |||| || || ||||| || ||||| || | ||| | || ||||| ||||| || | Sbjct 37580 AGCACCTGGGCGCTTATTGCCACCCTGGTCGACATAACGAGCGGTGTTGTTATAGACACG 37639 Query 76795 CAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGC 76854 | ||| || || | |||||| || || || || |||||| || || || || Sbjct 37640 AAGCATAGGGATGAGGCCGTTGGACGTTCCGTTCGTTCCACCGATGTATGAGCCGGTGGC 37699 Query 76855 ACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCG 76914 ||| || | || | || || || || || || | || ||||| | ||| || || Sbjct 37700 ACGGATGCGATGAACATTGAGACCAATACCGCCAGCGGTCTTGGAGATCATAGCGCA-CG 37758 Query 76915 T-TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGC 76973 | |||| ||||| |||||||| || || || |||||| | || | | || || ||| Sbjct 37759 TCTTCAGCGTGTCGTAGATGCCTTCGATGCTGTCATCCTTGATATCGATGAGGAAGCAGG 37818 Query 76974 TAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACC 77033 ||||| || | | ||||| || || || | || ||||| || || ||||| Sbjct 37819 AGGACATCTGTGGGTTGGGTGTTCCGGCGTTGAAAAGCGTTGGAGACGCGTGTGTGAAGT 37878 Query 77034 ATTTTTCAGA-AAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTG--ATGAA 77090 |||| | || | |||| |||||||| || || | ||||| || | | | || | Sbjct 37879 ATTTGTTGGACATGTAG-TTGTATGTCTCGATGGC--CTTCTCGATGTCTTCGCCGTGGA 37935 Query 77091 TTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTT 77150 | || || || |||||||| | ||| || || || || || || |||| ||||| Sbjct 37936 TGCCAACGGCTACACGCATGAGCATGTGTTGTGGACGCTCAGCAATCTTGCCGTTTATGC 37995 Query 77151 TCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAA 77187 | | ||||| ||||| || ||||| ||||| Sbjct 37996 GGAGGAGATATGAGCGTTCCAGGGTCTTAAAGCCAAA 38032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712927618211520