Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq412 125 2e-23 >seq412 Length=249799 Score = 125 bits (138), Expect = 2e-23 Identities = 154/209 (74%), Gaps = 1/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || |||||||| ||||||||||| |||| | || | |||||||| | Sbjct 4320 CAAG-TGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCATCTTCAA 4378 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || ||||||||||| || | |||||| |||| | || || ||||| || |||| Sbjct 4379 GCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGAA 4438 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 ||||| |||||| | || | | | || || ||| || || || || ||||| |||| Sbjct 4439 TTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATAGTCTTGC 4498 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || || ||||| ||||||| ||||||| Sbjct 4499 CGGTCAGGGTCTTGACGAAGATCTGCATT 4527 Score = 86.0 bits (94), Expect = 1e-11 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| ||||| ||||| ||||| || ||||||||||| |||| | ||| | ||||| Sbjct 4826 AGGACGAGATGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCC 4885 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || || ||||| || | | ||| ||||| | || ||| |||||||| || Sbjct 4886 TCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGTTGGTCAGGCGGGATGCCTTCCTTATCC 4945 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || || |||||| | || | |||| || ||| || || | || || || Sbjct 4946 TGGATCTTCGACTTGACATTGTCAATCGTGTCCGAGGACTCCACCTCCAAGGTGATGGTC 5005 Query 152073 TTGCCCGTGA 152082 ||||| |||| Sbjct 5006 TTGCCGGTGA 5015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153809549886631