Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq412 156 9e-33
seq738 116 8e-21
seq11 100 6e-16
seq46 93.3 9e-14
>seq412
Length=249799
Score = 156 bits (172), Expect = 9e-33
Identities = 172/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| ||||| || || |||| || | ||| ||||| |||||||||||||| |
Sbjct 4299 ACCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 4358
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| ||||||||||| || || || || ||||| ||||| | ||| || || || ||
Sbjct 4359 CAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 4418
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||| |||||||| || || || |||| ||| ||| | ||||| || || || | || ||
Sbjct 4419 AATGCCCTCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCAC 4478
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
||||| ||||| ||||| || |||| ||||| ||||| |||||||||
Sbjct 4479 CTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 4527
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || |||| || | || || || |||||||||||||| |
Sbjct 4071 ACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 4130
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||||| ||||| ||||| | || || || |||||||| | |||||| ||||| ||
Sbjct 4131 GAGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGG 4190
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
||||||||| || || |||||||| | || ||| | ||||| ||||| || | || ||
Sbjct 4191 AATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAAC 4250
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||||||||| || || | ||||| ||||| ||||||||
Sbjct 4251 CTCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || || ||||| | |||| || || || ||||||||||| |
Sbjct 4528 CCACCACGGAGACGGAGGACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 4587
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||||||||| || || || ||||| |||||||| || |||||||| ||
Sbjct 4588 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGG 4647
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| |||||||| || |||||||| | ||| ||| | ||||| || || | ||||||
Sbjct 4648 ATGCCCTCCTTATCCTGGATCTTCGATTTGACGTTGTCGATGGTATCGCTCGATTCGACC 4707
Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075
|| || || || |||||||| ||
Sbjct 4708 TCAAGGGTAATGGTCTTACCGGT 4730
Score = 116 bits (128), Expect = 8e-21
Identities = 148/204 (73%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||| || || ||||| || ||||| | || || || |||||||||||||| |
Sbjct 4810 ACCACCGCGGAGACGAAGGACGAGATGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGA 4869
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || || |||||||| || || || || || || ||||| || ||||||||| |||
Sbjct 4870 CAGAGTACGTCCATCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGTTGGTCAGGCGG 4929
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| || ||||| || |||||||| | || || | || || |||||||| | || ||
Sbjct 4930 GATGCCTTCCTTATCCTGGATCTTCGACTTGACATTGTCAATCGTGTCCGAGGACTCCAC 4989
Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075
|| | ||||| ||||| || ||
Sbjct 4990 CTCCAAGGTGATGGTCTTGCCGGT 5013
>seq738
Length=174967
Score = 116 bits (128), Expect = 8e-21
Identities = 112/144 (78%), Gaps = 0/144 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| ||||| || || || |||| || | || || || |||||||||||||| |
Sbjct 25228 ACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 25287
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||||||||| || || || ||||| ||||||||||| |||||||| ||
Sbjct 25288 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGG 25347
Query 282992 AATACCCTCCTTGTCTTGGATCTT 283015
||| ||||||||||| || |||||
Sbjct 25348 AATGCCCTCCTTGTCCTGAATCTT 25371
>seq11
Length=137347
Score = 100 bits (110), Expect = 6e-16
Identities = 103/135 (76%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||||||||| || || || || || | || || || |||||||||||||| |
Sbjct 124714 CCACCACGCAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 124773
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||| || || || || || ||||| ||||||| ||| |||||||| |||
Sbjct 124774 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGA 124833
Query 282993 ATACCCTCCTTGTCT 283007
|| ||||||||||||
Sbjct 124834 ATGCCCTCCTTGTCT 124848
>seq46
Length=404262
Score = 93.3 bits (102), Expect = 9e-14
Identities = 134/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 230222 TCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTAT 230281
|||| |||||||||| | | |||||| | || || ||||| ||||| || || || |
Sbjct 337905 TCTTCTCGGCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCT 337964
Query 230282 TTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGA 230341
|| |||| || || || | || | || ||| ||| |||||||||| || |||||
Sbjct 337965 GCTCTTGGCTCTCGGCAACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGA 338024
Query 230342 GCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAG 230401
| ||| || || || || || ||||||||||| ||| | ||| | ||||| || |
Sbjct 338025 GAACATCTCGCTGGCCGGTAAGACAAACTTCTTCGAGAAGAGGGTCGGTGATTACCAGAA 338084
Query 230402 GCCCGGTGT 230410
| |||||||
Sbjct 338085 GGCCGGTGT 338093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046728993965694
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |