Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04- 20] 761 sequences; 49,677,730 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq412 156 9e-33 seq738 116 8e-21 seq11 100 6e-16 seq46 93.3 9e-14 >seq412 Length=249799 Score = 156 bits (172), Expect = 9e-33 Identities = 172/229 (75%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| ||||| || || |||| || | ||| ||||| |||||||||||||| | Sbjct 4299 ACCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 4358 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || || || || ||||| ||||| | ||| || || || || Sbjct 4359 CAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGGGGG 4418 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| |||||||| || || || |||| ||| ||| | ||||| || || || | || || Sbjct 4419 AATGCCCTCCTTATCCTGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACTCCAC 4478 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 ||||| ||||| ||||| || |||| ||||| ||||| ||||||||| Sbjct 4479 CTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCATT 4527 Score = 145 bits (160), Expect = 2e-29 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || |||| || | || || || |||||||||||||| | Sbjct 4071 ACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 4130 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||| ||||| | || || || |||||||| | |||||| ||||| || Sbjct 4131 GAGCGTTCGGCCGTCCTCCAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGG 4190 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| || || |||||||| | || ||| | ||||| ||||| || | || || Sbjct 4191 AATACCCTCTTTATCCTGGATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAAC 4250 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||||||||| || || | ||||| ||||| |||||||| Sbjct 4251 CTCTAGCGTGATCGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | |||| || || || ||||||||||| | Sbjct 4528 CCACCACGGAGACGGAGGACGAGATGGAGCGTGGACTCCTTCTGAATGTTGTAGTCGGAC 4587 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||||||||| || || || ||||| |||||||| || |||||||| || Sbjct 4588 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAATCGCTGTTGGTCTGGGGGG 4647 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || |||||||| || |||||||| | ||| ||| | ||||| || || | |||||| Sbjct 4648 ATGCCCTCCTTATCCTGGATCTTCGATTTGACGTTGTCGATGGTATCGCTCGATTCGACC 4707 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 || || || || |||||||| || Sbjct 4708 TCAAGGGTAATGGTCTTACCGGT 4730 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || ||||| || ||||| | || || || |||||||||||||| | Sbjct 4810 ACCACCGCGGAGACGAAGGACGAGATGCAGAGTTGACTCCTTCTGGATGTTGTAGTCGGA 4869 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || |||||||| || || || || || || ||||| || ||||||||| ||| Sbjct 4870 CAGAGTACGTCCATCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGTTGGTCAGGCGG 4929 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || |||||||| | || || | || || |||||||| | || || Sbjct 4930 GATGCCTTCCTTATCCTGGATCTTCGACTTGACATTGTCAATCGTGTCCGAGGACTCCAC 4989 Query 283052 TTCGAGAGTGATCGTCTTACCCGT 283075 || | ||||| ||||| || || Sbjct 4990 CTCCAAGGTGATGGTCTTGCCGGT 5013 >seq738 Length=174967 Score = 116 bits (128), Expect = 8e-21 Identities = 112/144 (78%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || || || |||| || | || || || |||||||||||||| | Sbjct 25228 ACCGCCACGGAGACGGAGCACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCGGA 25287 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || ||||| ||||||||||| |||||||| || Sbjct 25288 AAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAAACGCTGTTGGTCCGGGGG 25347 Query 282992 AATACCCTCCTTGTCTTGGATCTT 283015 ||| ||||||||||| || ||||| Sbjct 25348 AATGCCCTCCTTGTCCTGAATCTT 25371 >seq11 Length=137347 Score = 100 bits (110), Expect = 6e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || || || || || | || || || |||||||||||||| | Sbjct 124714 CCACCACGCAGACGGAGGACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 124773 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || |||||||| || || || || || ||||| ||||||| ||| |||||||| ||| Sbjct 124774 AGGGTGCGGCCGTCTTCGAGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGA 124833 Query 282993 ATACCCTCCTTGTCT 283007 || |||||||||||| Sbjct 124834 ATGCCCTCCTTGTCT 124848 >seq46 Length=404262 Score = 93.3 bits (102), Expect = 9e-14 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 230222 TCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTAT 230281 |||| |||||||||| | | |||||| | || || ||||| ||||| || || || | Sbjct 337905 TCTTCTCGGCATGAACTCCAAGCTCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCT 337964 Query 230282 TTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGA 230341 || |||| || || || | || | || ||| ||| |||||||||| || ||||| Sbjct 337965 GCTCTTGGCTCTCGGCAACCAAAAGTTCTACAACGCCACCAACCCCTTCGACTTCATGGA 338024 Query 230342 GCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAG 230401 | ||| || || || || || ||||||||||| ||| | ||| | ||||| || | Sbjct 338025 GAACATCTCGCTGGCCGGTAAGACAAACTTCTTCGAGAAGAGGGTCGGTGATTACCAGAA 338084 Query 230402 GCCCGGTGT 230410 | ||||||| Sbjct 338085 GGCCGGTGT 338093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046728993965694