Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq412 127 1e-24
seq11 89.7 4e-13
>seq412
Length=249799
Score = 127 bits (140), Expect = 1e-24
Identities = 169/232 (73%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166
||| || |||| ||| | || |||| ||| || ||| ||| || ||||||||||| ||
Sbjct 4296 CATACCACCTCGCAGACGCAGAACCAAGTGGAGGGTGGACTCTTTCTGGATGTTGTAGTC 4355
Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGA 44226
|| || ||| | || || |||||||| ||||| ||||| | |||||||||||| |
Sbjct 4356 GGACAGGGTGCGGCCATCTTCAAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCCGG 4415
Query 44227 AGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATT 44285
|| | || ||||| ||| | | || || || | ||| | ||||| |||| || |
Sbjct 4416 GGGAATGCCCTCCTTATCC-TGAATTTTTGATTTGACGTTGTCGATGGTATCGGACGACT 4474
Query 44286 CCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
||||||| | || || ||||| || || |||||||| |||||||| |||||
Sbjct 4475 CCACCTCGAGGGTGATAGTCTTGCCGGTCAGGGTCTTGACGAAGATCTGCAT 4526
Score = 122 bits (134), Expect = 6e-23
Identities = 153/210 (73%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187
||||| ||| || || |||||| ||||||||||| || | ||| || |||| ||
Sbjct 4089 CACCAAGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTTCGGCCGTCCTC 4148
Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|| |||||| || |||||||| | ||| ||||| || | || | ||| || || |||
Sbjct 4149 CAACTGCTTACCAGCAAAGATGAGACGTTGCTGGTCCGGGGGAATACCCTCTTTATCCTG 4208
Query 44248 TATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307
||||| ||||| | | || ||||||| || || ||||| | ||| ||||||||
Sbjct 4209 GATCTTGGACTTCACGTTGTCGATTGTGTCGGACGACTCAACCTCTAGCGTGATCGTCTT 4268
Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| |||||||| |||||
Sbjct 4269 GCCGGTGAGTGTCTTGACGAAGATCTGCAT 4298
Score = 89.7 bits (98), Expect = 4e-13
Identities = 124/172 (72%), Gaps = 4/172 (2%)
Strand=Plus/Plus
Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205
|||||| ||||||||||| |||| || || | || || |||||||| || || ||
Sbjct 4846 CTCCTTCTGGATGTTGTAGTCGGACAGAGTACGTCCATCCTCGAGCTGCTTGCCTGCGAA 4905
Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTT--CAAT 44263
||||| ||||| || || | || | |||||||| ||| |||||| ||| || |
Sbjct 4906 AATCAAGCGCTGTTGGTCAGGCGGGATGCCTTCCTTATCCTGGATCTTCGACTTGACATT 4965
Query 44264 GTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGA 44315
|| | || ||||| | ||| |||||||||| || || ||||| || ||||
Sbjct 4966 GT--CAATCGTGTCCGAGGACTCCACCTCCAAGGTGATGGTCTTGCCGGTGA 5015
>seq11
Length=137347
Score = 89.7 bits (98), Expect = 4e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| |||||||| || |||||| ||||||||||| |||| ||| ||| |||| ||
Sbjct 124732 ACGAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCGTCTTCG 124791
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGT 44247
|||||||| ||||| ||||||| |||||| || |||| || | || ||||| || ||
Sbjct 124792 AGCTGCTTTCCGGCGAAGATCAGACGCTGTTGGTCTGGGGGAATGCCCTCCTTGTCTGT 124850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359987061201537
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |