Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Clohesyomyces_20aquaticus_20[genbank_20GCA_5F002105025.1_202017-04-
20] 761 sequences; 49,677,730 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq412 150 4e-31
seq738 98.7 2e-15
>seq412
Length=249799
Score = 150 bits (166), Expect = 4e-31
Identities = 159/208 (76%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || || || ||||||||||||||||| || ||
Sbjct 4523 CAGATCTTCGTCAAGACCCTGACCGGCAAGACTATCACCCTCGAGGTGGAGTCGTCCGAT 4464
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|||||||| ||||||||| ||| |||||||| || || || || || ||||| |||||
Sbjct 4463 ACCATCGACAACGTCAAATCAAAAATTCAGGATAAGGAGGGCATTCCCCCGGATCAGCAG 4404
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||||||||| || ||||| |||||||| | || || |||| || ||| ||
Sbjct 4403 CGTCTCATCTTCGCCGGCAAGCAGCTTGAAGATGGCCGCACCCTGTCCGACTACAACATC 4344
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTT 178131
|| ||||| || || || || |||| ||
Sbjct 4343 CAGAAAGAGTCCACCCTCCA-CTTGGTT 4317
Score = 118 bits (130), Expect = 3e-21
Identities = 150/205 (73%), Gaps = 1/205 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || ||||| || || |||||||| || ||||| || || |||
Sbjct 4295 CAGATCTTCGTCAAGACACTCACCGGCAAGACGATCACGCTAGAGGTTGAGTCGTCCGAC 4236
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| ||||| ||||| || ||||| ||||| ||||| || || || ||||||||||||
Sbjct 4235 ACAATCGACAACGTGAAGTCCAAGATCCAGGATAAAGAGGGTATTCCCCCGGACCAGCAA 4176
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||| | || || || | || || | || || ||| ||
Sbjct 4175 CGTCTCATCTTTGCTGGTAAGCAGTTGGAGGACGGCCGAACGCTCTCGGACTACAACATC 4116
Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128
|| || || || || ||||| ||||
Sbjct 4115 CAGAAGGAGTCGACTCTGCA-CTTG 4092
Score = 118 bits (130), Expect = 3e-21
Identities = 141/190 (74%), Gaps = 6/190 (3%)
Strand=Plus/Minus
Query 177943 TCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCAGACACCATCGAGAACGTCA 177999
|||| || || || || ||||| ||||| ||| ||| || |||||||| |||||||
Sbjct 4732 TCACCGGTAAGACCATTACCCTTGAGGTCGAATCGAGC---GATACCATCGACAACGTCA 4676
Query 178000 AACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCG 178059
|| ||||| ||||| || || || ||||| || ||||| || ||| | ||||||||||
Sbjct 4675 AATCGAAGATCCAGGATAAGGAGGGCATCCCCCCAGACCAACAGCGATTGATCTTCGCCG 4616
Query 178060 GAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACAC 178119
| || |||||||| ||||| | || || |||| || ||| | || || || || || |
Sbjct 4615 GCAAGCAGCTCGAGGATGGCCGCACCCTGTCCGACTACAACATTCAGAAGGAGTCCACGC 4556
Query 178120 TGCATCTTGT 178129
| ||||| ||
Sbjct 4555 TCCATCTCGT 4546
>seq738
Length=174967
Score = 98.7 bits (108), Expect = 2e-15
Identities = 97/124 (78%), Gaps = 1/124 (1%)
Strand=Plus/Minus
Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064
|||||||||||||| || || || || |||||||| || || | ||||||||||| ||
Sbjct 25371 AAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAACAGCGTTTGATCTTCGCCGGCAAG 25312
Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124
|||||||| ||||| | || ||| |||| || ||| |||| || || || || |||||
Sbjct 25311 CAGCTCGAGGATGGCCGCACCCTTTCCGACTACAACATCCAGAAGGAGTCGACTCTGCA- 25253
Query 178125 CTTG 178128
||||
Sbjct 25252 CTTG 25249
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203719463244634
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |